Miyakogusa Predicted Gene
- Lj3g3v3248370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3248370.1 Non Chatacterized Hit- tr|I1LQH3|I1LQH3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.29,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain; FAMILY
NOT NAMED,NULL; helix loop ,CUFF.45543.1
(675 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76731 similar to UniRef100_A7PW94 Cluster: Chromosome... 301 3e-81
gnl|LJGI|TC63791 similar to UniRef100_A7PW94 Cluster: Chromosome... 141 6e-33
gnl|LJGI|TC63619 similar to UniRef100_A7QWW1 Cluster: Chromosome... 68 8e-11
gnl|LJGI|TC62081 60 2e-08
gnl|LJGI|TC79094 similar to UniRef100_A7PW94 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC76731 similar to UniRef100_A7PW94 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 847
Score = 301 bits (152), Expect = 3e-81
Identities = 369/440 (83%), Gaps = 6/440 (1%)
Strand = Plus / Plus
Query: 223 tgggatgattctgcagtcatgtctgagaatttgagtggtcaaaaaagatttagagatgat 282
|||||||| |||| | | |||||||| ||| | ||||||| ||||||||||||||||||
Sbjct: 21 tgggatgactctgtaatgatgtctgacaatgttagtggtctgaaaagatttagagatgat 80
Query: 283 gatgta---aaaccattttctggtttaaatgcagctgaaagtcagaatgaaacaggaggc 339
|||| ||||||||||||||||| |||| |||||| | || |||||||||||||||
Sbjct: 81 gatgatgctaaaccattttctggtttgaatggagctgagactcggaatgaaacaggagga 140
Query: 340 caggctcctgcacctttggctcatcacatgagtttgccgaatacttcagcggaaatggca 399
||| || || |||||| |||||| |||||| |||| ||||||||| | |||||||||
Sbjct: 141 cagtcttct---tctttggttcatcagatgagtatgccaaatacttcatctgaaatggca 197
Query: 400 gccattgagaagtttttgaagttctcagattctgttccatgcaaaattcgtgctaagcgg 459
|| ||||||||||| || | ||||||||||||||||| |||||||||||||| |||||
Sbjct: 198 gctattgagaagttcctgcatttctcagattctgttccgtgcaaaattcgtgcccagcgg 257
Query: 460 ggatgtgccactcacccaagaagcattgcagagagggtgagaagaactaaaattagtgag 519
|| | |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 258 ggttttgccactcacccccgaagccttgcagagagggttagaagaactaaaattagtgag 317
Query: 520 cgaatgaggaaacttcaagatcttgtccccaacatggataagcaaacaaatacatcagac 579
|| ||||||||||| | |||||| |||||||||||||| ||| ||| || || |||||
Sbjct: 318 cgtatgaggaaactaccagatctggtccccaacatggaccagccaaccaacccagcagac 377
Query: 580 atgttggacttagctgttgattacattaaagaccttcaaatgcaagttcagactctttca 639
||||||||||| ||||| |||||||| | ||||||| || || || |||||| ||||||
Sbjct: 378 atgttggacttggctgtggattacatccaggaccttccaaagccagctcagacgctttca 437
Query: 640 gattgtcgcgcaaagtgtac 659
|| |||| || ||||||||
Sbjct: 438 gactgtcaagccaagtgtac 457
>gnl|LJGI|TC63791 similar to UniRef100_A7PW94 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 689
Score = 141 bits (71), Expect = 6e-33
Identities = 212/259 (81%)
Strand = Plus / Plus
Query: 359 ctcatcacatgagtttgccgaatacttcagcggaaatggcagccattgagaagtttttga 418
|||||||| ||||||| ||||| |||||||| || ||||| || || || ||||| |
Sbjct: 37 ctcatcacttgagtttaccgaaaacttcagcagagatggctgctatggataagttgcttc 96
Query: 419 agttctcagattctgttccatgcaaaattcgtgctaagcggggatgtgccactcacccaa 478
||||| | |||||||| || || ||||| | || || || || ||||| ||||| ||
Sbjct: 97 agttccctgattctgtaccttgtaaaatcagagcaaaacgaggctgtgctactcatcctc 156
Query: 479 gaagcattgcagagagggtgagaagaactaaaattagtgagcgaatgaggaaacttcaag 538
|||||||||| || |||||||||||||| || ||||| |||||||| ||||| ||||
Sbjct: 157 gaagcattgccgaacgggtgagaagaactcggatcagtgaacgaatgagaaaactacaag 216
Query: 539 atcttgtccccaacatggataagcaaacaaatacatcagacatgttggacttagctgttg 598
| ||||| || |||||||| |||||||| || |||||||||||||||||||| |||||||
Sbjct: 217 agcttgttccaaacatggacaagcaaactaacacatcagacatgttggacttggctgttg 276
Query: 599 attacattaaagaccttca 617
||||||||||||| |||||
Sbjct: 277 attacattaaagatcttca 295
>gnl|LJGI|TC63619 similar to UniRef100_A7QWW1 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 753
Score = 67.9 bits (34), Expect = 8e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 465 tgccactcacccaagaagcattgcagagagggtgagaagaac 506
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 368 tgccactcacccaagaagcattgcagagagggaaagaagaac 409
>gnl|LJGI|TC62081
Length = 1362
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 465 tgccactcacccaagaagcattgcagagagggtgagaagaac 506
||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 1124 tgccactcacccaagaagcgttgcagaaagggtaagaagaac 1165
>gnl|LJGI|TC79094 similar to UniRef100_A7PW94 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 944
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 479 gaagcattgcagagagggtgagaagaactaaaattagtgagcgaatgaggaaacttcaag 538
|||||||||| || |||||||||||||||| || ||||| ||||| |||||| | ||||
Sbjct: 449 gaagcattgccgaaagggtgagaagaactaggatcagtgaacgaataaggaaattgcaag 508
Query: 539 atcttgt 545
| |||||
Sbjct: 509 agcttgt 515