Miyakogusa Predicted Gene
- Lj3g3v3243140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3243140.1 Non Chatacterized Hit- tr|C6TK91|C6TK91_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,53.33,0.00005,seg,NULL; PRICHEXTENSN,NULL,CUFF.45629.1
(1005 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69798 similar to UniRef100_Q41707 Cluster: Extensin c... 149 4e-35
gnl|LJGI|TC72403 similar to UniRef100_Q01945 Cluster: Extensin; ... 96 5e-19
gnl|LJGI|TC77194 similar to UniRef100_Q41707 Cluster: Extensin c... 54 2e-06
>gnl|LJGI|TC69798 similar to UniRef100_Q41707 Cluster: Extensin class 1 protein
precursor; n=2; Vigna unguiculata|Rep: Extensin class 1
protein precursor - Vigna unguiculata (Cowpea), partial
(26%)
Length = 651
Score = 149 bits (75), Expect = 4e-35
Identities = 99/107 (92%)
Strand = Plus / Plus
Query: 899 tacatttacaagtccccaccacctccttctccatccccaccacctccatatgcttacaaa 958
||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 291 tacatttacaagtccccgccaccgccttctccatccccaccacctccatatgtctacaaa 350
Query: 959 tccccacctcctccatctcactcacctcctccaccctatgtctataa 1005
|| |||||||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 351 tctccacctccaccatctccctcacctcctccaccctacgtctataa 397
Score = 131 bits (66), Expect = 9e-30
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 28 tggcctcaactcctctatggagtagcattttgcctaatggctctcagtgttgctgctgat 87
|||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 54 tggcctcaactcctatatggagttgcattttgcctaatggctatcagtgttgctgctgat 113
Query: 88 tatgataagccatacaatgcagccccacca 117
||||||||||| ||| ||| ||||||||||
Sbjct: 114 tatgataagccttactatggagccccacca 143
Score = 107 bits (54), Expect = 1e-22
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 112 ccaccatctcatcagcaacatccacacccacccaaccattccaaaccaccttaccatggc 171
|||||||||||| ||||||| ||||| |||||| |||||| ||||||||||| |||||||
Sbjct: 168 ccaccatctcatgagcaacacccacagccaccctaccattacaaaccacctttccatggc 227
Query: 172 cacaaaagccctccatattactacaaatcc 201
| |||| ||||||||||||||||||||||
Sbjct: 228 cccaaagtccctccatattactacaaatcc 257
Score = 97.6 bits (49), Expect = 1e-19
Identities = 106/125 (84%)
Strand = Plus / Plus
Query: 516 ccaccatcaccttcaccacctcctccatatgtgtacaagtctccacctcctccatctcct 575
|||||||| ||||| || ||||| ||||| | |||||||| || || || || |||||
Sbjct: 264 ccaccatctccttctcctcctccgccatacatttacaagtccccgccaccgccttctcca 323
Query: 576 acaccaccacctccatatgtttacaaatctccacctcctccatcaccctcccctcctcca 635
| ||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 324 tccccaccacctccatatgtctacaaatctccacctccaccatctccctcacctcctcca 383
Query: 636 cccta 640
|||||
Sbjct: 384 cccta 388
Score = 85.7 bits (43), Expect = 5e-16
Identities = 118/143 (82%)
Strand = Plus / Plus
Query: 495 tatgtttacaagtctcctcctccaccatcaccttcaccacctcctccatatgtgtacaag 554
||||| ||||| ||||| ||||||||||| || ||||| ||||| || || || || |||
Sbjct: 339 tatgtctacaaatctccacctccaccatctccctcacctcctccaccctacgtctataag 398
Query: 555 tctccacctcctccatctcctacaccaccacctccatatgtttacaaatctccacctcct 614
|| || |||||||| || ||| |||| || ||||||||||| |||||||||||||||||
Sbjct: 399 tcaccgcctcctccctcaccttcaccgcctcctccatatgtatacaaatctccacctcca 458
Query: 615 ccatcaccctcccctcctccacc 637
|| || || | |||||||||||
Sbjct: 459 ccttctccaccacctcctccacc 481
Score = 79.8 bits (40), Expect = 3e-14
Identities = 121/148 (81%)
Strand = Plus / Plus
Query: 504 aagtctcctcctccaccatcaccttcaccacctcctccatatgtgtacaagtctccacct 563
||||| || ||||| || ||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 396 aagtcaccgcctcctccctcaccttcaccgcctcctccatatgtatacaaatctccacct 455
Query: 564 cctccatctcctacaccaccacctccatatgtttacaaatctccacctcctccatcaccc 623
|| || ||||| |||| || || || ||| | || || || ||||| ||||| || ||
Sbjct: 456 ccaccttctccaccacctcctccaccttatatctataagtcaccaccacctccttcccct 515
Query: 624 tcccctcctccaccctatgtttacaagt 651
||||||||||| || ||||| |||||||
Sbjct: 516 tcccctcctcctccttatgtgtacaagt 543
Score = 67.9 bits (34), Expect = 1e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 525 ccttcaccacctcctccatatgtgtacaagtctccacctcctccatctcc 574
||||| || |||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 513 ccttcccctcctcctccttatgtgtacaagtctccacctccaccatctcc 562
Score = 58.0 bits (29), Expect = 1e-07
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 908 aagtccccaccacctccttctccatccccaccacctccatatgcttacaaatccccacct 967
||||| |||||||||||||| || ||||| || ||||| |||| ||||| || ||||||
Sbjct: 492 aagtcaccaccacctccttccccttcccctcctcctccttatgtgtacaagtctccacct 551
Query: 968 cctccatctcactcacctcct 988
|| ||||||| |||||||||
Sbjct: 552 ccaccatctccatcacctcct 572
Score = 52.0 bits (26), Expect = 7e-06
Identities = 110/138 (79%)
Strand = Plus / Plus
Query: 495 tatgtttacaagtctcctcctccaccatcaccttcaccacctcctccatatgtgtacaag 554
||||| ||||| ||||| |||||||| || || |||| ||||| || ||| | || |||
Sbjct: 435 tatgtatacaaatctccacctccaccttctccaccacctcctccaccttatatctataag 494
Query: 555 tctccacctcctccatctcctacaccaccacctccatatgtttacaaatctccacctcct 614
|| ||||| ||||| || ||| | || || ||||| ||||| ||||| |||||||||||
Sbjct: 495 tcaccaccacctccttccccttcccctcctcctccttatgtgtacaagtctccacctcca 554
Query: 615 ccatcaccctcccctcct 632
||||| || || ||||||
Sbjct: 555 ccatctccatcacctcct 572
>gnl|LJGI|TC72403 similar to UniRef100_Q01945 Cluster: Extensin; n=1; Solanum
lycopersicum|Rep: Extensin - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (87%)
Length = 472
Score = 95.6 bits (48), Expect = 5e-19
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 528 tcaccacctcctccatatgtgtacaagtctccacctcctccatctcctacaccaccacct 587
||||| ||||| || ||||| || ||||| ||||||||||| || ||| |||| || |||
Sbjct: 2 tcacctcctccaccctatgtctataagtcaccacctcctccgtcaccttcaccgcctcct 61
Query: 588 ccatatgtttacaaatctccacctcctccatcaccctcccctcctccaccctatgtttac 647
|||||||| ||||||||||||||||| || ||||| || ||||||||||| ||| ||||
Sbjct: 62 ccatatgtatacaaatctccacctccaccttcaccatcacctcctccaccttatatttat 121
Query: 648 aagt 651
||||
Sbjct: 122 aagt 125
Score = 69.9 bits (35), Expect = 3e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 495 tatgtttacaagtctcctcctccaccatcaccttcaccacctcctccatatgtgtacaag 554
||||| || ||||| || ||||| || ||||||||||| |||||||||||||| |||||
Sbjct: 17 tatgtctataagtcaccacctcctccgtcaccttcaccgcctcctccatatgtatacaaa 76
Query: 555 tctccacctcc 565
|||||||||||
Sbjct: 77 tctccacctcc 87
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 979 ctcacctcctccaccctatgtctataa 1005
|||||||||||||||||||||||||||
Sbjct: 1 ctcacctcctccaccctatgtctataa 27
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 534 cctcctccatatgtgtacaagtctccacctcctccatct 572
|||||||| |||||||||||||| |||||||| ||||||
Sbjct: 152 cctcctccttatgtgtacaagtccccacctccaccatct 190
>gnl|LJGI|TC77194 similar to UniRef100_Q41707 Cluster: Extensin class 1 protein
precursor; n=2; Vigna unguiculata|Rep: Extensin class 1
protein precursor - Vigna unguiculata (Cowpea), partial
(41%)
Length = 895
Score = 54.0 bits (27), Expect = 2e-06
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 552 aagtctccacctcctccatctcctacaccaccacctccatatgtttacaaatctccacct 611
||||||||||| || ||||| || | |||||||||||||| |||||||| |||||
Sbjct: 8 aagtctccaccaccaccatcaccatctccaccacctccatactactacaaatcaccacca 67
Query: 612 cctccatcaccctcccctcctcc 634
|| |||||||| |||||||||||
Sbjct: 68 ccaccatcaccatcccctcctcc 90