Miyakogusa Predicted Gene
- Lj3g3v3240010.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3240010.2 Non Chatacterized Hit- tr|G7JDP5|G7JDP5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.51,0.000004,seg,NULL,CUFF.45640.2
(573 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69798 similar to UniRef100_Q41707 Cluster: Extensin c... 76 3e-13
gnl|LJGI|TC72403 similar to UniRef100_Q01945 Cluster: Extensin; ... 60 2e-08
>gnl|LJGI|TC69798 similar to UniRef100_Q41707 Cluster: Extensin class 1 protein
precursor; n=2; Vigna unguiculata|Rep: Extensin class 1
protein precursor - Vigna unguiculata (Cowpea), partial
(26%)
Length = 651
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 1 atggtggaggtggagatttataaacatatggaggtggtggagagggagacggtgggggtg 60
||||||||||||||||||| || ||||||||||||||||| || ||||| || || || |
Sbjct: 366 atggtggaggtggagatttgtagacatatggaggtggtggggatggagaaggcggtggcg 307
Query: 61 gggacttgta 70
||||||||||
Sbjct: 306 gggacttgta 297
Score = 75.8 bits (38), Expect = 3e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 423 ggtgaaggagaagggggaggaggagacttgtagacataaggtggtggtggagatggggat 482
||||| ||||| || ||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 568 ggtgatggagatggtggaggtggagacttgtacacataaggaggaggaggggaaggggaa 509
Query: 483 ggaggtggtggtgatttgtagacataaggttgaggagg 520
|||||||||||||| || |||| ||||||| |||||||
Sbjct: 508 ggaggtggtggtgacttatagatataaggtggaggagg 471
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 519 ggggatttgtagtaatatggagggacattggggccatg 556
|||||||||||||||||||||||||| |||||||||||
Sbjct: 259 ggggatttgtagtaatatggagggactttggggccatg 222
Score = 61.9 bits (31), Expect = 4e-09
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 402 ttgtacacatatggaggtggtggtgaaggagaagggggaggaggagacttgtagacataa 461
||||| ||||||||||| || |||||||| || || ||||| || ||||| ||||| ||
Sbjct: 445 ttgtatacatatggaggaggcggtgaaggtgagggaggaggcggtgacttatagacgtag 386
Query: 462 ggtggtggtggagatggggatggaggtggtggtgatttgtagacata 508
||||| || || || || ||||| || ||||| ||||||||||||||
Sbjct: 385 ggtggaggaggtgagggagatggtggaggtggagatttgtagacata 339
Score = 60.0 bits (30), Expect = 2e-08
Identities = 84/102 (82%)
Strand = Plus / Minus
Query: 402 ttgtacacatatggaggtggtggtgaaggagaagggggaggaggagacttgtagacataa 461
||||| ||||||||||||||||| || |||||||| || || || |||||||| | ||
Sbjct: 349 ttgtagacatatggaggtggtggggatggagaaggcggtggcggggacttgtaaatgtat 290
Query: 462 ggtggtggtggagatggggatggaggtggtggtgatttgtag 503
|| || || ||||| || ||||| |||||||| |||||||||
Sbjct: 289 ggcggaggaggagaaggagatggtggtggtggggatttgtag 248
Score = 52.0 bits (26), Expect = 4e-06
Identities = 89/110 (80%)
Strand = Plus / Minus
Query: 399 gacttgtacacatatggaggtggtggtgaaggagaagggggaggaggagacttgtagaca 458
|||||||||||||| ||||| || || ||||| ||||| || || || ||||| |||| |
Sbjct: 544 gacttgtacacataaggaggaggaggggaaggggaaggaggtggtggtgacttatagata 485
Query: 459 taaggtggtggtggagatggggatggaggtggtggtgatttgtagacata 508
|||||||| || || | ||| || || || ||||| |||||||| |||||
Sbjct: 484 taaggtggaggaggtggtggagaaggtggaggtggagatttgtatacata 435
>gnl|LJGI|TC72403 similar to UniRef100_Q01945 Cluster: Extensin; n=1; Solanum
lycopersicum|Rep: Extensin - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (87%)
Length = 472
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3 ggtggaggtggagatttataaacatatggaggtggtggagagggagacggtgggggtggg 62
||||||||||||||||| || ||||||||||| || || || || ||||| || |||||
Sbjct: 90 ggtggaggtggagatttgtatacatatggaggaggcggtgaaggtgacggaggaggtggt 31
Query: 63 gacttgtagacata 76
||||| ||||||||
Sbjct: 30 gacttatagacata 17