Miyakogusa Predicted Gene
- Lj3g3v3237920.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3237920.3 Non Chatacterized Hit- tr|I1LQJ5|I1LQJ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16810
PE,82.31,0,GTP1OBG,GTP binding domain; P-loop containing nucleoside
triphosphate hydrolases,NULL; no descriptio,CUFF.45517.3
(1947 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76563 homologue to UniRef100_A7NZR8 Cluster: Chromoso... 856 0.0
gnl|LJGI|BP037579 similar to UniRef100_A7NZR8 Cluster: Chromosom... 813 0.0
>gnl|LJGI|TC76563 homologue to UniRef100_A7NZR8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (23%)
Length = 921
Score = 856 bits (432), Expect = 0.0
Identities = 438/440 (99%)
Strand = Plus / Plus
Query: 1508 ggcaaagtgtggacaagattattgatgctgctagtgaagttgaaaaggagagatcaagaa 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 ggcaaagtgtggacaagattattgatgctgctagtgaagttgaaaaggagagatcaagaa 100
Query: 1568 gactcggtacttctatactgaatcaagtagtgcgggaagcattagcttttaagcctcctc 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gactcggtacttctatactgaatcaagtagtgcgggaagcattagcttttaagcctcctc 160
Query: 1628 ccaggacacgaggtggaaaaagagggcgtgtttactattgtactcaggctgctataaggc 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ccaggacacgaggtggaaaaagagggcgtgtttactattgtactcaggctgctataaggc 220
Query: 1688 cgcctacatttgtgttctttgtcaatgattcaaaactttttcctgagacataccggcgct 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cgcctacatttgtgttctttgtcaatgattcaaaactttttcctgagacataccggcgct 280
Query: 1748 acatggagaagcagctgcgtatggatgcaggtttttctggtactcccattcggcttctgt 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 acatggagaagcagctgcgtatggatgcaggtttttctggtactcccattcggcttctgt 340
Query: 1808 ggcgcagcagaaggaaaatgggaagagatgaagacaaagctgcaacacggacgcaagaga 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggcgcagcagaaggaaaatgggaagagatgaagacaaagctgcaacacggacgcaagaga 400
Query: 1868 atcttacatcaaatgaccggaaaataggaaaagatgaagacaaagctgaaacaaggatgc 1927
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 401 atcttacatcaaatgaccggaaaataggaaaagatgaagacaaagctgcaacaaggatgc 460
Query: 1928 aagtgaatcttacataaaat 1947
||||||||||||||| ||||
Sbjct: 461 aagtgaatcttacatcaaat 480
Score = 93.7 bits (47), Expect = 4e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 1820 ggaaaatgggaagagatgaagacaaagctgcaacacggacgcaagagaatcttacatcaa 1879
||||||| |||| |||||||||||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 419 ggaaaataggaaaagatgaagacaaagctgcaacaaggatgcaagtgaatcttacatcaa 478
Query: 1880 atgaccggaaa 1890
|||||| ||||
Sbjct: 479 atgacccgaaa 489
>gnl|LJGI|BP037579 similar to UniRef100_A7NZR8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (31%)
Length = 421
Score = 813 bits (410), Expect = 0.0
Identities = 420/422 (99%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 1042 agaccaaatgtgggaaaaagtagcattttgaatgcacttgttggtgaagacagaacaata 1101
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agaccaaatgtgggaaaaagtagcattt-gaatgcacttgttggtgaagacagaacaata 59
Query: 1102 gtcagccccatcagtggcactacacgtgatgctatcgatactgaatttactggagtagat 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gtcagccccatcagtggcactacacgtgatgctatcgatactgaatttactggagtagat 119
Query: 1162 ggccagaagttccgtcttattgatactgctggaatcaggagaagggcagccgtagtttca 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ggccagaagttccgtcttattgatactgctggaatcaggagaagggcagccgtagtttca 179
Query: 1222 gctggaagtacaacagaggctttgtcaggaaatcgagcattccgtgctattcgtcgctct 1281
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 180 gctggaagtacaacagaggctttgtcagtaaatcgagcattccgtgctattcgtcgctct 239
Query: 1282 gatattgttgctcttgtcattgaggccttgtcttgtatcactgaacaggacttcaagata 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gatattgttgctcttgtcattgaggccttgtcttgtatcactgaacaggacttcaagata 299
Query: 1342 gctgaaaggatagaaaaagaagggaaaggttgtgtcatcgttgtaaacaagtgggataca 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gctgaaaggatagaaaaagaagggaaaggttgtgtcatcgttgtaaacaagtgggataca 359
Query: 1402 attccaaataaaaatcagcagactgcaacatactatgagcaggatgtcagggagaagctt 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 attccaaataaaaatcagcagactgcaacatactatgagcaggatgtcagggagaagctt 419
Query: 1462 cg 1463
||
Sbjct: 420 cg 421