Miyakogusa Predicted Gene

Lj3g3v3237870.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3237870.1 Non Chatacterized Hit- tr|I1LJW0|I1LJW0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44605 PE,90.23,0,TRNA
(5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE,tRNA-specific
2-thiouridylase; tRNA_Me_,CUFF.45491.1
         (801 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73035 similar to UniRef100_A7NZR6 Cluster: Chromosome...  1074   0.0  
gnl|LJGI|TC69793 similar to UniRef100_A7NZR6 Cluster: Chromosome...   539   e-153

>gnl|LJGI|TC73035 similar to UniRef100_A7NZR6 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (57%)
          Length = 1088

 Score = 1074 bits (542), Expect = 0.0
 Identities = 552/554 (99%), Gaps = 1/554 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgggttttgactatgttgcctctgggcattatgcaaaggttatccacccgttggaagat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 536  atgggttttgactatgttgcctctgggcattatgcaaaggttatccacccgtttgaagat 595

                                                                        
Query: 61   cagatggatgagctttctgttcttgaattatcacaagacatggtgaaggaccaaacatac 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  cagatggatgagctttctgttcttgaattatcacaagacatggtgaaggaccaaacatac 655

                                                                        
Query: 121  tttctctctcacctctcacaatcccagttgaagcgacttctttttccgcttggttgtatt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656  tttctctctcacctctcacaatcccagttgaagcgacttctttttccgcttggttgtatt 715

                                                                        
Query: 181  cccaaggatgaagttcgtaggttggccaccaaatttgatctaccgaataaggatagaaag 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  cccaaggatgaagttcgtaggttggccaccaaatttgatctaccgaataaggatagaaag 775

                                                                        
Query: 241  gattcccagggaatatgctttttgggcaagataagattcagtgaatttgttgcaagacat 300
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  gat-cccagggaatatgctttttgggcaagataagattcagtgaatttgttgcaagacat 834

                                                                        
Query: 301  attggggagagagaaggtatcatactggaagctgagacaggagatttccttggcaaacac 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  attggggagagagaaggtatcatactggaagctgagacaggagatttccttggcaaacac 894

                                                                        
Query: 361  cggggcttttggttttatactattggtcagcgtcagggtctacggttacctggaggccca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  cggggcttttggttttatactattggtcagcgtcagggtctacggttacctggaggccca 954

                                                                        
Query: 421  tggtatgttgttgagaaggatgttaaaaacaatgtagtttttgtgtcaagaaattacttt 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  tggtatgttgttgagaaggatgttaaaaacaatgtagtttttgtgtcaagaaattacttt 1014

                                                                        
Query: 481  tcctttgacaaaagaaggcgcatatttcgtgttggctctttaaaatggtttagtgggtta 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 tcctttgacaaaagaaggcgcatatttcgtgttggctctttaaaatggtttagtgggtta 1074

                          
Query: 541  ccccctagcccgac 554
            ||||||||||||||
Sbjct: 1075 ccccctagcccgac 1088


>gnl|LJGI|TC69793 similar to UniRef100_A7NZR6 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 785

 Score =  539 bits (272), Expect = e-153
 Identities = 272/272 (100%)
 Strand = Plus / Plus

                                                                       
Query: 530 ttagtgggttaccccctagcccgacaagtcagctcaaatgcaaggtgagacatggccctg 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttagtgggttaccccctagcccgacaagtcagctcaaatgcaaggtgagacatggccctg 60

                                                                       
Query: 590 gattctataattgtagcttacaaatggaagttgcaagtgataaccaagttgacgctgccg 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gattctataattgtagcttacaaatggaagttgcaagtgataaccaagttgacgctgccg 120

                                                                       
Query: 650 tcgtccacatatctgaagacgatcaaggcctagcagctgggcagtttgcggccttctatg 709
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgtccacatatctgaagacgatcaaggcctagcagctgggcagtttgcggccttctatg 180

                                                                       
Query: 710 agggaaggacatgtataggttctggtgtgattttggagtcctgggatgatcaaagttttc 769
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agggaaggacatgtataggttctggtgtgattttggagtcctgggatgatcaaagttttc 240

                                           
Query: 770 cagtctgtgcaaaagctttagaaattgcaaga 801
           ||||||||||||||||||||||||||||||||
Sbjct: 241 cagtctgtgcaaaagctttagaaattgcaaga 272