Miyakogusa Predicted Gene
- Lj3g3v3236570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3236570.1 Non Chatacterized Hit- tr|G1M2H4|G1M2H4_AILME
Uncharacterized protein (Fragment) OS=Ailuropoda
melan,51.65,7e-19,Skp1_POZ,SKP1 component, POZ; POZ domain,BTB/POZ
fold; Found in Skp1 protein family,SKP1 component; ,CUFF.45472.1
(300 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67268 similar to UniRef100_A7NYR5 Cluster: Chromosome... 595 e-170
gnl|LJGI|TC63542 similar to UniRef100_A7NYR5 Cluster: Chromosome... 377 e-104
>gnl|LJGI|TC67268 similar to UniRef100_A7NYR5 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 679
Score = 595 bits (300), Expect = e-170
Identities = 300/300 (100%)
Strand = Plus / Plus
Query: 1 atgaagaaggaagacacagtgaagctgatcagtgcggagggtttcgaattcatcgtcgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atgaagaaggaagacacagtgaagctgatcagtgcggagggtttcgaattcatcgtcgat 169
Query: 61 aaggaagctgctatggtttcccagaccattcacaacatgctcacctctccagggagtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 aaggaagctgctatggtttcccagaccattcacaacatgctcacctctccagggagtttc 229
Query: 121 tctgaaagggagcgcggtcaagtcacatttcctgaaatcagcaccgccattctcgaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tctgaaagggagcgcggtcaagtcacatttcctgaaatcagcaccgccattctcgaaaag 289
Query: 181 atttgccagtatttctattggcatcttcaatttgctaatgggaaggagacagagtttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atttgccagtatttctattggcatcttcaatttgctaatgggaaggagacagagtttcct 349
Query: 241 attgaacctgaactgactctggagctaatgatggctgccaattacctgcatacttgagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 attgaacctgaactgactctggagctaatgatggctgccaattacctgcatacttgagca 409
>gnl|LJGI|TC63542 similar to UniRef100_A7NYR5 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 670
Score = 377 bits (190), Expect = e-104
Identities = 190/190 (100%)
Strand = Plus / Plus
Query: 111 agggagtttctctgaaagggagcgcggtcaagtcacatttcctgaaatcagcaccgccat 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agggagtttctctgaaagggagcgcggtcaagtcacatttcctgaaatcagcaccgccat 308
Query: 171 tctcgaaaagatttgccagtatttctattggcatcttcaatttgctaatgggaaggagac 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tctcgaaaagatttgccagtatttctattggcatcttcaatttgctaatgggaaggagac 368
Query: 231 agagtttcctattgaacctgaactgactctggagctaatgatggctgccaattacctgca 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agagtttcctattgaacctgaactgactctggagctaatgatggctgccaattacctgca 428
Query: 291 tacttgagca 300
||||||||||
Sbjct: 429 tacttgagca 438
Score = 224 bits (113), Expect = 2e-58
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 1 atgaagaaggaagacacagtgaagctgatcagtgcggagggtttcgaattcatcgtcgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atgaagaaggaagacacagtgaagctgatcagtgcggagggtttcgaattcatcgtcgat 104
Query: 61 aaggaagctgctatggtttcccagaccattcacaacatgctcacctctccagg 113
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aaggaagctgctatggtttcccagaccattcacaacatgctcacctctccagg 157