Miyakogusa Predicted Gene

Lj3g3v3235440.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3235440.1 Non Chatacterized Hit- tr|B9S3E6|B9S3E6_RICCO
Transcriptional regulator SUPERMAN, putative
OS=Ricinu,38.78,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; no descriptio,CUFF.45466.1
         (495 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69775 similar to UniRef100_A5JUQ4 Cluster: C2H2 zinc ...    82   4e-15

>gnl|LJGI|TC69775 similar to UniRef100_A5JUQ4 Cluster: C2H2 zinc finger protein; n=1;
           Glycine max|Rep: C2H2 zinc finger protein - Glycine max
           (Soybean), partial (36%)
          Length = 1168

 Score = 81.8 bits (41), Expect = 4e-15
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgcaagaggggcttctctaatgcacaagcactaggtggccacatgaacatccataggaaa 141
           |||||||| || ||||| ||||||||||||||||||||||||||||| |||||||| |  
Sbjct: 142 tgcaagagagggttctcaaatgcacaagcactaggtggccacatgaatatccatagaagg 201

                            
Query: 142 gacaaagccaagctcaa 158
           || | ||||||||||||
Sbjct: 202 gatagagccaagctcaa 218