Miyakogusa Predicted Gene

Lj3g3v3214340.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3214340.1 Non Chatacterized Hit- tr|J3MN61|J3MN61_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G2,44.37,1e-18,Homeodomain-like,Homeodomain-like;
Myb_DNA-binding,SANT/Myb domain; myb_SHAQKYF: myb-like
DNA-bindin,CUFF.45463.1
         (952 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73217 similar to UniRef100_A7NYW2 Cluster: Chromosome...   379   e-104

>gnl|LJGI|TC73217 similar to UniRef100_A7NYW2 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 485

 Score =  379 bits (191), Expect = e-104
 Identities = 194/195 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggggaagaggtgaggatgatggatgaagagcgtttgatggagtgggagaagggtctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atgggggaagaggtgaggatgatggatgaagagcgtttgatggagtgggagaagggtctc 350

                                                                       
Query: 61  ccaagcgttcacgatctaactccgctttctcagccgctgatcccgccggagctcgcaacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ccaagcgttcacgatctaactccgctttctcagccgctgatcccgccggagctcgcaacc 410

                                                                       
Query: 121 gccttcagcatctcgccggagccccgccgcacactcctggacgtcaaccgcgcatcccgc 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 411 gccttcagcatctcgccggagccccgccgcacactcctcgacgtcaaccgcgcatcccgc 470

                          
Query: 181 aacacgctctccatc 195
           |||||||||||||||
Sbjct: 471 aacacgctctccatc 485