Miyakogusa Predicted Gene
- Lj3g3v3213190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3213190.1 Non Chatacterized Hit- tr|B9SYB3|B9SYB3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.92,3e-18,seg,NULL; GRAS,Transcription factor GRAS; FAMILY NOT
NAMED,NULL,CUFF.45445.1
(2122 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82684 similar to UniRef100_A7NYY1 Cluster: Chromosome... 1933 0.0
gnl|LJGI|TC77713 similar to UniRef100_A7NYX9 Cluster: Chromosome... 1461 0.0
gnl|LJGI|TC75440 similar to UniRef100_A7NYY1 Cluster: Chromosome... 159 9e-38
gnl|LJGI|TC71529 weakly similar to UniRef100_Q1PCS0 Cluster: GRA... 119 7e-26
gnl|LJGI|GO027994 weakly similar to UniRef100_A7PIT4 Cluster: Ch... 84 4e-15
gnl|LJGI|AV767223 similar to UniRef100_A7PIT4 Cluster: Chromosom... 74 4e-12
gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705... 56 9e-07
gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome... 56 9e-07
>gnl|LJGI|TC82684 similar to UniRef100_A7NYY1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 1012
Score = 1933 bits (975), Expect = 0.0
Identities = 1000/1011 (98%)
Strand = Plus / Plus
Query: 351 attctatgatgtgctcggtcgaagctatccttcatcgccgcaccaagtccagggtggttt 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attctatgatgtgctcggtcgaagctatccttcatcgccgcaccaagtccagggtggttt 61
Query: 411 ccgtgatgataacgctgatccagatgatggttttggtgggggaactactagttctgaggg 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccgtgatgataacgctgatccagatgatggttttggtgggggaactactagttctgaggg 121
Query: 471 atatagcagtaacaccactgatacttcatgtgagtctgatttggttaacggtgctggtga 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atatagcagtaacaccactgatacttcatgtgagtctgatttggttaacggtgctggtga 181
Query: 531 tttcgagtcttattttcggcaaagagctctagttgattccccaggcaatagctctgaggt 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tttcgagtcttattttcggcaaagagctctagttgattccccaggcaatagctctgaggt 241
Query: 591 tttggatggagtacctcttgatccattgagaggtacacaacctggtgcccttttttcaaa 650
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 242 tttggatggagtacctcttgatccattgggaggtacacaacctggtgcccttttttcaaa 301
Query: 651 tggagccttggatgtgattcaatggaaggttaagccacaggtgattcaagagagtgtgat 710
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 302 tggagccttggatgtgattcaatggaaggttaagccacaggtgattctagagagtgtgat 361
Query: 711 tcggggttctgcggcaaccaaaggaccaagggagaagagaggtcatcttatgaataattt 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcggggttctgcggcaaccaaaggaccaagggagaagagaggtcatcttatgaataattt 421
Query: 771 ctcacatgtggaagaggagagaagcaacaagctttcagctgtttactctgatgattcgga 830
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 422 ctcacatgtggaagaggagagaagcaacaagctttcagctgtttactcttatgattcgga 481
Query: 831 gctatcagaaatgtttgatgaggtgctgctttgcaaggatggtaaaagtccatcnnnnnn 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gctatcagaaatgtttgatgaggtgctgctttgcaaggatggtaaaagtccatctttttt 541
Query: 891 nngttttaatcatgaaccatcacagattgctggctcaagaggatctaatggaaagacatc 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttgttttaatcatgaaccatcacagattgctggctcaagaggatctaatggaaagacatc 601
Query: 951 gcgttcaaagaaaggttccaagaaggggacgagtccaactacaacggtagatttatggac 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gcgttcaaagaaaggttccaagaaggggacgagtccaactacaacggtagatttatggac 661
Query: 1011 cctgctaactcaatgtgcacaggccgtggctagctatgaccaaaggaatgcgagtgagat 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cctgctaactcaatgtgcacaggccgtggctagctatgaccaaaggaatgcgagtgagat 721
Query: 1071 actcaagcagattagggacaactcttcaccttttggcgatggactccagcgtttagctca 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 actcaagcagattagggacaactcttcaccttttggcgatggactccagcgtttagctca 781
Query: 1131 ttatgttgccaatgggctggagacgcgattatttgctgggacaccgaagtatacactcct 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttatgttgccaatgggctggagacgcgattatttgctgggacaccgaagtatacactcct 841
Query: 1191 tcagtcttcatctgctgctgatatgttgaaagcttacaaagtgtatatcacagcatctcc 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tcagtcttcatctgctgctgatatgttgaaagcttacaaagtgtatatcacagcatctcc 901
Query: 1251 attttggaggatgacaaatttcttggccaacagaacaattctaaagctagtacagaatgt 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 attttggaggatgacaaatttcttggccaacagaacaattctaaagctagtacagaatgt 961
Query: 1311 gagcagtgttcacattattgactttgggattttctatggtttccagtggcc 1361
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 gagcagtgttcacattattgactttgggattttctatggtttccagtggcc 1012
>gnl|LJGI|TC77713 similar to UniRef100_A7NYX9 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (34%)
Length = 942
Score = 1461 bits (737), Expect = 0.0
Identities = 749/753 (99%)
Strand = Plus / Plus
Query: 1370 tccaacgtctatcagaaagaccgggtgggccaccaaagcttcgaattaccggaattgatc 1429
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1 tccaacgtctatcagaaagaccgggtggaccaccaaagcttcgaattgccggaattgatc 60
Query: 1430 ttcctcagccgggatttaggcctacagaaagggtcgaggagacggggtggcgccttgcga 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcctcagccgggatttaggcctacagaaagggtcgaggagacggggtggcgccttgcga 120
Query: 1490 agtactgcaagaggtttggagtgccatttgagtacaatttccttgcacagaaatgggaaa 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtactgcaagaggtttggagtgccatttgagtacaatttccttgcacagaaatgggaaa 180
Query: 1550 ctataagacttgaggacctcaaaatcgacatggaagaagaagtaaccgtggtgaactgtt 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctataagacttgaggacctcaaaatcgacatggaagaagaagtaaccgtggtgaactgtt 240
Query: 1610 tgtacagattgaagaacctctctgatgaaactgtgactgtgaactgtccaagagatgctg 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtacagattgaagaacctctctgatgaaactgtgactgtgaactgtccaagagatgctg 300
Query: 1670 tgttgaagttgatcaggagggttaatccaaacatcttcatacatggggtaatcaatggaa 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgttgaagttgatcaggagggttaatccaaacatcttcatacatggggtaatcaatggaa 360
Query: 1730 cttacaatgcaccgttttttctgactcggttcagggaggcactcttccatttctcatcat 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttacaatgcaccgttttttctgactcggttcagggaggcactcttccatttctcatcat 420
Query: 1790 tgtttgacatgtttgaggctactgtaccgcgcgaagataaatataggttgatgtttgagg 1849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtttgacatgtttgaggctactgtaccgcgcgaagataaatataggttgatgtttgagg 480
Query: 1850 aagggttatttggacgggatgcggttaatgtgatagcgtgtgagggtgcagagagggttg 1909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagggttatttggacgggatgcggttaatgtgatagcgtgtgagggtgcagagagggttg 540
Query: 1910 aaaggccagagacctacaagcagtggcaggttcggaaccgcagagcagggttcaagcaac 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaggccagagacctacaagcagtggcaggttcggaaccgcagagcagggttcaagcaac 600
Query: 1970 ttccattagcgccggaactctcgagtagagtgaaggaaatggtgaagaaggaatatcata 2029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttccattagcgccggaactctcgagtagagtgaaggaaatggtgaagaaggaatatcata 660
Query: 2030 aagattttgtggtggatgaggatggcaagtgggttttacagggatggaaagggaggattc 2089
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagattttgtggtggatgaggatggcaagtgggttttacagggatggaaagggaggattt 720
Query: 2090 ttcatgctgtttcgtgttgggttcctgcttagg 2122
||| |||||||||||||||||||||||||||||
Sbjct: 721 ttcgtgctgtttcgtgttgggttcctgcttagg 753
>gnl|LJGI|TC75440 similar to UniRef100_A7NYY1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 975
Score = 159 bits (80), Expect = 9e-38
Identities = 152/176 (86%)
Strand = Plus / Plus
Query: 1000 gatttatggaccctgctaactcaatgtgcacaggccgtggctagctatgaccaaaggaat 1059
||||| ||||| |||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 550 gatttgtggacactgctaactcaatgtgcacaagctgtggcaagctatgaccaaaggaat 609
Query: 1060 gcgagtgagatactcaagcagattagggacaactcttcaccttttggcgatggactccag 1119
|| | ||| || ||||| ||||||||| | |||||||||||| |||||||||||| ||
Sbjct: 610 gcaaatgaaatcctcaaccagattaggcaacactcttcaccttcaggcgatggactcgag 669
Query: 1120 cgtttagctcattatgttgccaatgggctggagacgcgattatttgctgggacacc 1175
|||||||||||||| |||||||||| || ||||| | |||| ||||||||||||
Sbjct: 670 cgtttagctcattactttgccaatggccttgagacaaggttatctgctgggacacc 725
Score = 63.9 bits (32), Expect = 4e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1304 agaatgtgagcagtgttcacattattgactttgggattttctatggtttccagtggcctt 1363
|||||| |||||||||||| || ||||| ||||| || | |||||| ||||| |||||||
Sbjct: 857 agaatgagagcagtgttcatatcattgattttggcatctgctatggcttccaatggcctt 916
Query: 1364 gcctcatc 1371
||||||||
Sbjct: 917 gcctcatc 924
>gnl|LJGI|TC71529 weakly similar to UniRef100_Q1PCS0 Cluster: GRAS1; n=1; Nicotiana
tabacum|Rep: GRAS1 - Nicotiana tabacum (Common tobacco),
partial (27%)
Length = 620
Score = 119 bits (60), Expect = 7e-26
Identities = 216/268 (80%)
Strand = Plus / Plus
Query: 1304 agaatgtgagcagtgttcacattattgactttgggattttctatggtttccagtggcctt 1363
|||||| |||||||||||| || ||||| ||||| || | |||||| ||||| |||||||
Sbjct: 270 agaatgagagcagtgttcatatcattgattttggcatctgctatggcttccaatggcctt 329
Query: 1364 gcctcatccaacgtctatcagaaagaccgggtgggccaccaaagcttcgaattaccggaa 1423
|||||||| || || |||||||||| || || || |||| |||||| | |||||||
Sbjct: 330 gcctcatcaaatcactctcagaaagacatggcggtcctccaaggcttcgtgtaaccggaa 389
Query: 1424 ttgatcttcctcagccgggatttaggcctacagaaagggtcgaggagacggggtggcgcc 1483
|||| ||||||| ||| || ||| |||| |||| ||||| |||||||| ||| |||| |
Sbjct: 390 ttgagcttcctcggcccgggtttcggccggcagagagggtggaggagactgggcggcgac 449
Query: 1484 ttgcgaagtactgcaagaggtttggagtgccatttgagtacaatttccttgcacagaaat 1543
| | ||| |||||||||| ||| || |||||||| ||||| | ||||||| ||||||
Sbjct: 450 tggagaactactgcaagaagttcaaggttccatttgaatacaactgccttgcaaagaaat 509
Query: 1544 gggaaactataagacttgaggacctcaa 1571
|||| ||||| | ||||||||| |||||
Sbjct: 510 gggagactatcaaacttgaggatctcaa 537
Score = 89.7 bits (45), Expect = 7e-17
Identities = 105/125 (84%)
Strand = Plus / Plus
Query: 1051 caaaggaatgcgagtgagatactcaagcagattagggacaactcttcaccttttggcgat 1110
||||||||||| | ||| || ||||| ||||||||| | |||||||||||| ||||||
Sbjct: 14 caaaggaatgcaaatgaaatcctcaaccagattaggcaacactcttcaccttcaggcgat 73
Query: 1111 ggactccagcgtttagctcattatgttgccaatgggctggagacgcgattatttgctggg 1170
|||||| |||||||||||||||| |||||||||| | ||||| | |||| |||||||
Sbjct: 74 ggactcgagcgtttagctcattactttgccaatggccatgagacaaggttatctgctggg 133
Query: 1171 acacc 1175
|||||
Sbjct: 134 acacc 138
>gnl|LJGI|GO027994 weakly similar to UniRef100_A7PIT4 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 141
Score = 83.8 bits (42), Expect = 4e-15
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 2007 aatggtgaagaaggaatatcataaagattttgtggtggatgaggatggcaagtg 2060
||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 54 aatggtgaagagggaatatcacaaagattttgtagtggatgaggatggcaagtg 1
>gnl|LJGI|AV767223 similar to UniRef100_A7PIT4 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 241
Score = 73.8 bits (37), Expect = 4e-12
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 2044 gatgaggatggcaagtgggttttacagggatggaaagggaggattcttcatgctgtttcg 2103
||||||||||||||||||||||| ||||| ||||||||| | ||||| ||||| ||||
Sbjct: 241 gatgaggatggcaagtgggttttgcaggggtggaaagggcgtattctgaatgctatttct 182
Query: 2104 tgttgggttcctgctta 2120
|||||||||||||||
Sbjct: 181 gcttgggttcctgctta 165
>gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705800 protein; n=1; Oryza
sativa Japonica Group|Rep: Os11g0705800 protein - Oryza
sativa subsp. japonica (Rice), partial (12%)
Length = 724
Score = 56.0 bits (28), Expect = 9e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 1876 aatgtgatagcgtgtgagggtgcagagagggttgaaaggccagagacctacaagcagtgg 1935
||||||||||| ||||| ||| |||||| |||| ||||| ||||| ||||| ||||||
Sbjct: 653 aatgtgatagcatgtgaaggtttggagaggattgagaggcctgagacatacaaacagtgg 594
Query: 1936 caggttcggaac 1947
|||||| |||||
Sbjct: 593 caggttaggaac 582
>gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1057
Score = 56.0 bits (28), Expect = 9e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 1876 aatgtgatagcgtgtgagggtgcagagagggttgaaaggccagagacctacaagcagtgg 1935
||||||||||| ||||| ||| |||||| |||| ||||| ||||| ||||| ||||||
Sbjct: 459 aatgtgatagcatgtgaaggtttggagaggattgagaggcctgagacatacaaacagtgg 518
Query: 1936 caggttcggaac 1947
|||||| |||||
Sbjct: 519 caggttaggaac 530