Miyakogusa Predicted Gene
- Lj3g3v3211130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3211130.1 tr|G7JUT4|G7JUT4_MEDTR SCARECROW-like protein
OS=Medicago truncatula GN=MTR_4g064120 PE=4 SV=1,80.38,0,FAMILY NOT
NAMED,NULL; GRAS,Transcription factor GRAS,CUFF.45441.1
(633 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome... 555 e-157
gnl|LJGI|TC66921 weakly similar to UniRef100_A3E2G3 Cluster: SCA... 498 e-140
gnl|LJGI|FS353678 weakly similar to UniRef100_A3E2G3 Cluster: SC... 420 e-117
gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705... 210 8e-54
gnl|LJGI|TC76237 similar to UniRef100_A3E2G3 Cluster: SCARECROW-... 182 2e-45
gnl|LJGI|FS322058 similar to UniRef100_A3E2G3 Cluster: SCARECROW... 141 6e-33
gnl|LJGI|TC70675 similar to UniRef100_A3E2G3 Cluster: SCARECROW-... 109 2e-23
>gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1057
Score = 555 bits (280), Expect = e-157
Identities = 430/480 (89%)
Strand = Plus / Plus
Query: 147 ccctttacctggctttcgtcccacagaacgacttgaggaaactggtcgtcgcttggccaa 206
|||||||||||||||||| |||||| || | ||||||| ||||||||||| ||||| ||
Sbjct: 14 ccctttacctggctttcgccccacacaaaaaattgaggagactggtcgtcgtttggctaa 73
Query: 207 ctattgcaagcgtttcaatgttccctttgagtacaatgctgtagcatcaaggaactggga 266
||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||
Sbjct: 74 ctattgcaagcgtttcaatgttccctttgagtacactgccatagcatcacggaactggga 133
Query: 267 aaccattcgagttgaagaccttaaaattaagagcaacgagtttgttgctgtgaactgtat 326
||||||||||||||||||||||| |||||||||| | |||||||||||||| |||| ||
Sbjct: 134 aaccattcgagttgaagaccttagaattaagagccatgagtttgttgctgtcaactccat 193
Query: 327 gcttaggttcaagaatttgctggatgagactattgaaatgaacagtcctagagatgcagt 386
| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 194 gatgaggttcaagaatttgctggatgagactattgaaatgaacagtcccagagatgctgt 253
Query: 387 tctgcatttgatcaggaggataaatccagatatttttgctcactccatcataaatggatc 446
||||| ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 254 tctgcttttgatcaggaagataaatccagatgtttttgctcactccatcattaatggatc 313
Query: 447 tttcaatgccccttttttcgtcactcggtttagggaggccttgttctatttttctgctgt 506
||||| | |||||||||| | ||| ||||||||||||||||||||| |||||||||||||
Sbjct: 314 tttcagtacccctttttttgccacacggtttagggaggccttgttccatttttctgctgt 373
Query: 507 ttatgatatttgtgacagtgtcataccccgggataaccaatggaggatgatgattgagag 566
|| ||| || ||||| ||||||| ||||||| |||||||||||| |||| ||||||
Sbjct: 374 ttttgacatgcttgacactgtcatatcccgggaaaaccaatggagggtgatagatgagag 433
Query: 567 ggagatggtgggccggaacgctatgaatgtgatagcatgtgaaggtttggagaggattga 626
|||| | ||||| || | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggaggttgtgggtcgtagctctatgaatgtgatagcatgtgaaggtttggagaggattga 493
>gnl|LJGI|TC66921 weakly similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein
1; n=1; Castanea sativa|Rep: SCARECROW-like protein 1 -
Castanea sativa (Sweet chestnut), partial (27%)
Length = 1180
Score = 498 bits (251), Expect = e-140
Identities = 419/475 (88%)
Strand = Plus / Plus
Query: 152 tacctggctttcgtcccacagaacgacttgaggaaactggtcgtcgcttggccaactatt 211
|||||||||||||||||||| || || ||||||| || |||||||| ||||| |||||||
Sbjct: 2 tacctggctttcgtcccacacaaagaattgaggagaccggtcgtcgtttggctaactatt 61
Query: 212 gcaagcgtttcaatgttccctttgagtacaatgctgtagcatcaaggaactgggaaacca 271
||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 62 gcaagcgtttcaaagttccctttgagtacactgccatagcatcacggaactgggaaaccc 121
Query: 272 ttcgagttgaagaccttaaaattaagagcaacgagtttgttgctgtgaactgtatgctta 331
|||||||||||||||||||||||||||||||||||||||||||||| || || ||| | |
Sbjct: 122 ttcgagttgaagaccttaaaattaagagcaacgagtttgttgctgtcaattgcatgatga 181
Query: 332 ggttcaagaatttgctggatgagactattgaaatgaacagtcctagagatgcagttctgc 391
||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||
Sbjct: 182 ggttcaagaatttgctggatgagtctagtgaaatgaacagtcccagagatgctgttctgc 241
Query: 392 atttgatcaggaggataaatccagatatttttgctcactccatcataaatggatctttca 451
||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 242 ttttgatcaggaagataaatccagatatttttgctcaggccatcattaatggatctttca 301
Query: 452 atgccccttttttcgtcactcggtttagggaggccttgttctatttttctgctgtttatg 511
||||||| || ||||| ||||||||||| ||||||||| ||||||||||| || |
Sbjct: 302 gcacccctttctttgtcacacggtttagggaagccttgttccatttttctgctattctag 361
Query: 512 atatttgtgacagtgtcataccccgggataaccaatggaggatgatgattgagagggaga 571
| || |||||||||| ||||||| ||||||||||||||||||| |||||| ||||
Sbjct: 362 acatgcttgacagtgtctggtcccgggaaaaccaatggaggatgatgagtgagagagaga 421
Query: 572 tggtgggccggaacgctatgaatgtgatagcatgtgaaggtttggagaggattga 626
| ||||| |||| | |||||||||||||||||||||||||||| |||||| ||||
Sbjct: 422 tcgtgggtcggagctctatgaatgtgatagcatgtgaaggttttgagaggcttga 476
>gnl|LJGI|FS353678 weakly similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein
1; n=1; Castanea sativa|Rep: SCARECROW-like protein 1 -
Castanea sativa (Sweet chestnut), partial (22%)
Length = 764
Score = 420 bits (212), Expect = e-117
Identities = 275/296 (92%)
Strand = Plus / Minus
Query: 331 aggttcaagaatttgctggatgagactattgaaatgaacagtcctagagatgcagttctg 390
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 756 aggttcaagaatttactggatgagactattgaaatgaacagtcctagagatgctgttctg 697
Query: 391 catttgatcaggaggataaatccagatatttttgctcactccatcataaatggatctttc 450
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 696 catttgatcaggaggataaatccggatatttttgctcagtccatcataaatggatctttc 637
Query: 451 aatgccccttttttcgtcactcggtttagggaggccttgttctatttttctgctgtttat 510
||| ||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||
Sbjct: 636 aattcccctttctttgtcacacggtttagggaagccttgttctatttttctgctatttat 577
Query: 511 gatatttgtgacagtgtcataccccgggataaccaatggaggatgatgattgagagggag 570
||||||| ||| ||||||||||||| ||| |||||||||||| |||||||||||||||||
Sbjct: 576 gatatttttgatagtgtcataccccaggaaaaccaatggagggtgatgattgagagggag 517
Query: 571 atggtgggccggaacgctatgaatgtgatagcatgtgaaggtttggagaggattga 626
|||||||| |||| || |||||||||||||||||||||||||||| |||| ||||
Sbjct: 516 atggtgggtcggactgcgatgaatgtgatagcatgtgaaggtttggcgagggttga 461
>gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705800 protein; n=1;
Oryza sativa Japonica Group|Rep: Os11g0705800 protein -
Oryza sativa subsp. japonica (Rice), partial (12%)
Length = 724
Score = 210 bits (106), Expect = 8e-54
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 521 acagtgtcataccccgggataaccaatggaggatgatgattgagagggagatggtgggcc 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 acagtgtcataccccgggataaccaatggaggatgatgattgagagggagatggtgggcc 665
Query: 581 ggaacgctatgaatgtgatagcatgtgaaggtttggagaggattga 626
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ggaacgctatgaatgtgatagcatgtgaaggtttggagaggattga 619
>gnl|LJGI|TC76237 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (25%)
Length = 754
Score = 182 bits (92), Expect = 2e-45
Identities = 221/264 (83%)
Strand = Plus / Plus
Query: 1 atgattaagaaagcagctgccaaagctgaaacccttcatgttattgattttggcatcttc 60
||||||| ||||| |||||| ||||| ||| | |||||| | ||||||||||| ||| |
Sbjct: 491 atgattatgaaagaagctgcaaaagcagaatctcttcatatcattgattttggtatccta 550
Query: 61 tacggcttccagtggccattactcatcaagtttttatcagagagagatggtggacctccc 120
|| || |||||||||||| | || || ||||| |||||||| ||||||||||||||||||
Sbjct: 551 tatggtttccagtggccaattcttattaagttcttatcagaaagagatggtggacctccc 610
Query: 121 aagctgaggatcacaggaatagaataccctttacctggctttcgtcccacagaacgactt 180
|| ||| ||||||||| ||||| | ||||||||| || ||||| ||||| ||| || ||
Sbjct: 611 aaattgaagatcacagggatagagttccctttacccggatttcggcccacggaaagaatt 670
Query: 181 gaggaaactggtcgtcgcttggccaactattgcaagcgtttcaatgttccctttgagtac 240
|| || || |||| ||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gatgagaccggtcatcgtctcaccaactattgcaagcgtttcaatgttccctttgagtac 730
Query: 241 aatgctgtagcatcaaggaactgg 264
||||| | ||||||| |||||||
Sbjct: 731 aatgccattgcatcaaagaactgg 754
>gnl|LJGI|FS322058 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (14%)
Length = 764
Score = 141 bits (71), Expect = 6e-33
Identities = 98/107 (91%)
Strand = Plus / Minus
Query: 1 atgattaagaaagcagctgccaaagctgaaacccttcatgttattgattttggcatcttc 60
||||||||||||||| |||| ||||||||||| || ||| ||||||||||||| |||||
Sbjct: 109 atgattaagaaagcatctgcaaaagctgaaactctgcatattattgattttggtatctta 50
Query: 61 tacggcttccagtggccattactcatcaagtttttatcagagagaga 107
|| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 49 tatggcttccagtggccattactcatcaagtttttatcagaaagaga 3
>gnl|LJGI|TC70675 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (14%)
Length = 677
Score = 109 bits (55), Expect = 2e-23
Identities = 82/91 (90%)
Strand = Plus / Plus
Query: 536 gggataaccaatggaggatgatgattgagagggagatggtgggccggaacgctatgaatg 595
|||||||||||||||||| | |||||||||| |||| ||||| ||| | ||||||||||
Sbjct: 22 gggataaccaatggaggaggttgattgagagagagagtgtggggcgggaggctatgaatg 81
Query: 596 tgatagcatgtgaaggtttggagaggattga 626
|||||||||||||||||||||||||| ||||
Sbjct: 82 tgatagcatgtgaaggtttggagagggttga 112