Miyakogusa Predicted Gene
- Lj3g3v3211120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3211120.1 Non Chatacterized Hit- tr|I1LQP5|I1LQP5_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,77.11,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; GRAS,Transcription factor GRAS,CUFF.45444.1
(2257 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP062474 similar to UniRef100_A3E2G3 Cluster: SCARECROW... 1098 0.0
gnl|LJGI|TC70675 similar to UniRef100_A3E2G3 Cluster: SCARECROW-... 70 7e-11
gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705... 66 1e-09
gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome... 66 1e-09
gnl|LJGI|TC66921 weakly similar to UniRef100_A3E2G3 Cluster: SCA... 66 1e-09
gnl|LJGI|TC77713 similar to UniRef100_A7NYX9 Cluster: Chromosome... 56 1e-06
>gnl|LJGI|BP062474 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (9%)
Length = 598
Score = 1098 bits (554), Expect = 0.0
Identities = 589/594 (99%), Gaps = 5/594 (0%)
Strand = Plus / Plus
Query: 638 tttcagatcaaacattgctttgcaagagtgattctgtgcttcaatttgagagaggttttg 697
||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| |
Sbjct: 10 tttcagatcaaacat-gctt-gcaagagtgattctgtgcttcaatt-gagagaggttt-g 65
Query: 698 aggaagccagtaagtttcttcctaaaacgaatccattagttattgattttgagaacaggt 757
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 66 aggaagccagtaagtttcttcctaaaacgaatccattagttat-gattttgagaacaggt 124
Query: 758 cacatggctatatcccttcgattagaaaggttcctcagcaggaggtaattaagattgagg 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cacatggctatatcccttcgattagaaaggttcctcagcaggaggtaattaagattgagg 184
Query: 818 cggatgaaaataagcatttttccgctgagccgagaggaaggaagaatcatgagagggagg 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cggatgaaaataagcatttttccgctgagccgagaggaaggaagaatcatgagagggagg 244
Query: 878 atgaaacagatttacaagatgggagaagcaacaagcagtcagctgtttacaccgatgaca 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atgaaacagatttacaagatgggagaagcaacaagcagtcagctgtttacaccgatgaca 304
Query: 938 gtgagctatcagaattatttgataaggtactgctgggcgtgccgtgtggaaatcaggaag 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtgagctatcagaattatttgataaggtactgctgggcgtgccgtgtggaaatcaggaag 364
Query: 998 ctccttcgtgtatcctcaaggaagagcagcctaatggacctgacattagcatggggaaga 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctccttcgtgtatcctcaaggaagagcagcctaatggacctgacattagcatggggaaga 424
Query: 1058 aagaagaaacaaacaagtctggtggtggaaagagccgtgctaagaaacaaggagacaaga 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aagaagaaacaaacaagtctggtggtggaaagagccgtgctaagaaacaaggagacaaga 484
Query: 1118 agggagttgtggatctgaggtcactattgattctatgtgcacaagctgtttcttctgatg 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 agggagttgtggatctgaggtcactattgattctatgtgcacaagctgtttcttctgatg 544
Query: 1178 atcgagcgactgccagtgattcgctaaagcagataaggcaacactcatccctgt 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atcgagcgactgccagtgattcgctaaagcagataaggcaacactcatccctgt 598
>gnl|LJGI|TC70675 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (14%)
Length = 677
Score = 69.9 bits (35), Expect = 7e-11
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 2008 atgaatattatagcttgtgagggttctgagagggttgagaggcctgagacatacaagtta 2067
|||||| | ||||| ||||| |||| |||||||||||||||||||||||||| ||
Sbjct: 75 atgaatgtgatagcatgtgaaggtttggagagggttgagaggcctgagacatataaaagg 134
Query: 2068 tggatggttaggaatacgagggctggtttca 2098
||| |||||||||||| |||||||||||||
Sbjct: 135 tggcaggttaggaatacaagggctggtttca 165
Score = 61.9 bits (31), Expect = 2e-08
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 2203 caaggttggaaaggccgtataatatatgcttcctcttgttgggtacc 2249
||||||||||||||||| || || ||||||||| |||||||||||||
Sbjct: 270 caaggttggaaaggccgcattatgtatgcttccacttgttgggtacc 316
>gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705800 protein; n=1; Oryza
sativa Japonica Group|Rep: Os11g0705800 protein - Oryza
sativa subsp. japonica (Rice), partial (12%)
Length = 724
Score = 65.9 bits (33), Expect = 1e-09
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 2008 atgaatattatagcttgtgagggttctgagagggttgagaggcctgagacatacaagtta 2067
|||||| | ||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct: 656 atgaatgtgatagcatgtgaaggtttggagaggattgagaggcctgagacatacaaacag 597
Query: 2068 tggatggttaggaatacgagggctggtttcaggcaacttcc 2108
||| ||||||||| || ||||||||||||| ||| |||||
Sbjct: 596 tggcaggttaggaacacaagggctggtttcaagcagcttcc 556
>gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1057
Score = 65.9 bits (33), Expect = 1e-09
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 2008 atgaatattatagcttgtgagggttctgagagggttgagaggcctgagacatacaagtta 2067
|||||| | ||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct: 456 atgaatgtgatagcatgtgaaggtttggagaggattgagaggcctgagacatacaaacag 515
Query: 2068 tggatggttaggaatacgagggctggtttcaggcaacttcc 2108
||| ||||||||| || ||||||||||||| ||| |||||
Sbjct: 516 tggcaggttaggaacacaagggctggtttcaagcagcttcc 556
>gnl|LJGI|TC66921 weakly similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1;
n=1; Castanea sativa|Rep: SCARECROW-like protein 1 -
Castanea sativa (Sweet chestnut), partial (27%)
Length = 1180
Score = 65.9 bits (33), Expect = 1e-09
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 2008 atgaatattatagcttgtgagggttctgagagggttgagaggcctgagacatacaagtta 2067
|||||| | ||||| ||||| |||| ||||||| ||||||||||||||||||||||
Sbjct: 439 atgaatgtgatagcatgtgaaggttttgagaggcttgagaggcctgagacatacaaacag 498
Query: 2068 tggatggttaggaatacgagggctggtttcaggcaacttcc 2108
||| | ||||||| || ||||||||||||| ||| |||||
Sbjct: 499 tggcagattaggaacacaagggctggtttcaagcagcttcc 539
>gnl|LJGI|TC77713 similar to UniRef100_A7NYX9 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (34%)
Length = 942
Score = 56.0 bits (28), Expect = 1e-06
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 1969 aggttgatgtttgagaaagagttctttgggagggaagtgatgaatattatagcttgtgag 2028
||||||||||||||| ||| ||| ||||| |||| | | | ||| | ||||| ||||||
Sbjct: 465 aggttgatgtttgaggaagggttatttggacgggatgcggttaatgtgatagcgtgtgag 524
Query: 2029 ggttctgagagggttgagaggcctgagacatacaag 2064
||| | ||||||||||| ||||| ||||| ||||||
Sbjct: 525 ggtgcagagagggttgaaaggccagagacctacaag 560