Miyakogusa Predicted Gene

Lj3g3v3200870.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3200870.1 Non Chatacterized Hit- tr|E1ZAI7|E1ZAI7_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,54.22,7e-19,Tim10-like,Mitochondrial inner membrane
translocase complex, Tim8/9/10/13-zinc finger-like;
MITOCHON,CUFF.45428.1
         (285 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71121 similar to UniRef100_Q9XGX7 Cluster: Mitochondr...   565   e-161
gnl|LJGI|FS343947 weakly similar to UniRef100_A7NZ03 Cluster: Ch...    76   1e-13

>gnl|LJGI|TC71121 similar to UniRef100_Q9XGX7 Cluster: Mitochondrial import inner
           membrane translocase subunit Tim9; n=3; Oryza
           sativa|Rep: Mitochondrial import inner membrane
           translocase subunit Tim9 - Oryza sativa subsp. japonica
           (Rice), complete
          Length = 527

 Score =  565 bits (285), Expect = e-161
 Identities = 285/285 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacaagagcatgttagcagacatggattcgcttggcgaagccgataagcaaagaatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  atggacaagagcatgttagcagacatggattcgcttggcgaagccgataagcaaagaatg 130

                                                                       
Query: 61  tctaccatgatcgatcagctccaaatccgtgacagtctgagaatgtataattccctggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tctaccatgatcgatcagctccaaatccgtgacagtctgagaatgtataattccctggtg 190

                                                                       
Query: 121 gagagatgctttactgattgtgttgacacattcaagcataaatccctgcaaaagcaagag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gagagatgctttactgattgtgttgacacattcaagcataaatccctgcaaaagcaagag 250

                                                                       
Query: 181 gaaagctgtgttcgaagatgcgcagagaaatttctgaagcactctatgcgtgttggcatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaaagctgtgttcgaagatgcgcagagaaatttctgaagcactctatgcgtgttggcatg 310

                                                        
Query: 241 aggtttgccgagctcaaccaaggagctgcaacgcaagattgatgt 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aggtttgccgagctcaaccaaggagctgcaacgcaagattgatgt 355


>gnl|LJGI|FS343947 weakly similar to UniRef100_A7NZ03 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 621

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 46  gataagcaaagaatgtctaccatgatcgatcagctccaaatccgtgacagtctgagaatg 105
           ||||| ||||||||||| |||||| | || |||||||||| ||| |||||||| || |||
Sbjct: 198 gataaacaaagaatgtccaccatggtagaccagctccaaacccgagacagtctaaggatg 257

                                     
Query: 106 tataattccctggtggagagatgctt 131
           ||||||||  | ||||||||||||||
Sbjct: 258 tataattcaatagtggagagatgctt 283