Miyakogusa Predicted Gene
- Lj3g3v3188600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3188600.1 Non Chatacterized Hit- tr|C5Y8K0|C5Y8K0_SORBI
Putative uncharacterized protein Sb05g027610
OS=Sorghu,49.08,1e-18,seg,NULL,CUFF.45405.1
(895 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65072 similar to UniRef100_A7NZ33 Cluster: Chromosome... 1758 0.0
gnl|LJGI|TC63844 similar to UniRef100_A7NZ33 Cluster: Chromosome... 141 9e-33
>gnl|LJGI|TC65072 similar to UniRef100_A7NZ33 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (40%)
Length = 1332
Score = 1758 bits (887), Expect = 0.0
Identities = 893/895 (99%)
Strand = Plus / Plus
Query: 1 atgtcattgagtgggctagttattgctttaagtgttgcctttgggtgttttcttctggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgtcattgagtgggctagttattgctttaagtgttgcctttgggtgttttcttctggct 325
Query: 61 cttgctgcagagctttgctatttgttgtggtggaagaaaagaagaactcacacagaaact 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cttgctgcagagctttgctatttgttgtggtggaagaaaagaagaactcacacagaaacc 385
Query: 121 gaagaagaagaccatagcaatgatgcaaaggggttgcttaatggagtgtgttggaaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gaagaagaagaccatagcaatgatgcaaaggggttgcttaatggagtgtgttggaaggca 445
Query: 181 ccatctaccaccaattcagtgactgtgaggagcagtgaaccagaaaacaaaagtcatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccatctaccaccaattcagtgactgtgaggagcagtgaaccagaaaacaaaagtcatgaa 505
Query: 241 ccagatttggagttaggtaaggatgttgttgggttgaagaattttggagaagaaggggtg 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 506 ccagatttggagttaggtaaggatgttgctgggttgaagaattttggagaagaaggggtg 565
Query: 301 gaatgtgagttgatgaggctgcacaacctggctggtcctccaaggtttctgttcacaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaatgtgagttgatgaggctgcacaacctggctggtcctccaaggtttctgttcacaatc 625
Query: 361 aaagaggaaagcaaagaagatttggattctgaagatggtaggagcagaaaagggtcaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aaagaggaaagcaaagaagatttggattctgaagatggtaggagcagaaaagggtcaaga 685
Query: 421 acaaggagcttgagtgatataatggtggcaacaattgattcccctttccttaaccctgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 acaaggagcttgagtgatataatggtggcaacaattgattcccctttccttaaccctgtg 745
Query: 481 gcttcatcacctttgaagtgttctttggatggtcttgattctttcaagcaccaagggttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gcttcatcacctttgaagtgttctttggatggtcttgattctttcaagcaccaagggttc 805
Query: 541 aatcctctctttgaatcatcaatggagtcagagctgaacagatttagatctaattcacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 aatcctctctttgaatcatcaatggagtcagagctgaacagatttagatctaattcacca 865
Query: 601 cctccaaaattcaagttcttgagggatgcagaggagaagttgtatagaagattgattgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 cctccaaaattcaagttcttgagggatgcagaggagaagttgtatagaagattgattgag 925
Query: 661 gaagctcagagaaaggcaaaagcaaatggttctgtagcagaatctgaggctaaaggtctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 gaagctcagagaaaggcaaaagcaaatggttctgtagcagaatctgaggctaaaggtctc 985
Query: 721 cctaattcaatatcagtaacagataacagtaaccggtcattgcttagatttgtcaacaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 cctaattcaatatcagtaacagataacagtaaccggtcattgcttagatttgtcaacaac 1045
Query: 781 aaagagagagagcaggtaaagcttcaacatccttcaagttcatcacaggttcttccactg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 aaagagagagagcaggtaaagcttcaacatccttcaagttcatcacaggttcttccactg 1105
Query: 841 tcatcttctcccacaacattcaaaccagttgagaaagcatccatggtacattaga 895
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 tcatcttctcccacaacattcaaaccagttgagaaagcatccatggtacattaga 1160
>gnl|LJGI|TC63844 similar to UniRef100_A7NZ33 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 1179
Score = 141 bits (71), Expect = 9e-33
Identities = 295/371 (79%), Gaps = 24/371 (6%)
Strand = Plus / Plus
Query: 310 ttgatgaggctgcacaacctggctggtcctccaaggtttctgttcacaatcaaagaggaa 369
||||||||||||||||| |||||||||| ||||||||||| | |||||||| ||||||
Sbjct: 641 ttgatgaggctgcacaatttggctggtccaccaaggtttctctacacaatcacggaggaa 700
Query: 370 agcaaagaagatttggattctgaagatggtaggagcagaaaagggtcaagaacaaggagc 429
| |||| |||||||| ||||||||| ||| || ||| || || ||||||||||||
Sbjct: 701 actgaagaggatttggaatctgaagatattag---cataaagggttctagaacaaggagc 757
Query: 430 ttgagtgatataatggtggcaacaattgattcccctttccttaaccctgtggcttcatca 489
||||||||| | |||||| || || |||| |||| ||||||| ||
Sbjct: 758 ttgagtgattt---------------tgattcaccctttcttacccctatggcttcctcg 802
Query: 490 cctttgaagtgttctttggatggtcttgattctt---tcaagcaccaagggttcaatcct 546
|| ||||||||||||||||| | ||||||||| |||||| |||||||||||||||
Sbjct: 803 ccgttgaagtgttctttggacaatattgattcttacaacaagcatcaagggttcaatcct 862
Query: 547 ctctttgaatcatcaatggagtcagagctgaacagatttagatctaattcaccacctcca 606
|| |||||||||||| || |||||| | ||||| ||| |||| ||| || ||||||
Sbjct: 863 ctgtttgaatcatcagcagaatcagagttcaacaggtttcgatc---ttcgccgcctcca 919
Query: 607 aaattcaagttcttgagggatgcagaggagaagttgtatagaagattgattgaggaagct 666
||| |||||||||||||||| |||||||| || |||||| ||| ||||||||| ||||||
Sbjct: 920 aaactcaagttcttgagggaagcagaggataaattgtatcgaaaattgattgaagaagct 979
Query: 667 cagagaaaggc 677
| |||||||||
Sbjct: 980 cggagaaaggc 990