Miyakogusa Predicted Gene
- Lj3g3v3188540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3188540.1 Non Chatacterized Hit- tr|I1LK36|I1LK36_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1665
PE=,83.52,0,yidC_oxa1_cterm: membrane protein insertase,
YidC/,Membrane insertase OXA1/ALB3/YidC; seg,NULL; 60KD,CUFF.45410.1
(1287 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011683 homologue to UniRef100_Q9FY06 Cluster: Inner m... 1116 0.0
gnl|LJGI|TC73869 similar to UniRef100_Q9FY06 Cluster: Inner memb... 874 0.0
gnl|LJGI|TC66666 similar to UniRef100_Q9FY06 Cluster: Inner memb... 821 0.0
gnl|LJGI|TC64837 similar to UniRef100_Q9FY06 Cluster: Inner memb... 712 0.0
>gnl|LJGI|GO011683 homologue to UniRef100_Q9FY06 Cluster: Inner membrane protein PPF-1,
chloroplast precursor; n=1; Pisum sativum|Rep: Inner
membrane protein PPF-1, chloroplast precursor - Pisum
sativum (Garden pea), partial (43%)
Length = 572
Score = 1116 bits (563), Expect = 0.0
Identities = 569/571 (99%)
Strand = Plus / Plus
Query: 480 aagatatgccggcaatcaggaaagaatacaacttgagacctcaaggctatatacgcaggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagatatgccggcaatcaggaaagaatacaacttgagacctcaaggctatatacgcaggc 61
Query: 540 tggggttaacccgttggcaggttgcttaccaactttagctacaattcctgtctggattgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tggggttaacccgttggcaggttgcttaccaactttagctacaattcctgtctggattgg 121
Query: 600 tctctaccaagcattatcaaatgtggcaaatgagggactgttaacagaaggtttcttatg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tctctaccaagcattatcaaatgtggcaaatgagggactgttaacagaaggtttcttatg 181
Query: 660 gatcccttctctgggtggtcctacttccattgctgctagacaaagtggatctggaatttc 719
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 182 gatcccttctctgggtggtcctacttccattgctgctaggcaaagtggatctggaatttc 241
Query: 720 ttggctttttccatttgtggatggtcatccacctttgggttggcaggatactgcagcata 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttggctttttccatttgtggatggtcatccacctttgggttggcaggatactgcagcata 301
Query: 780 tcttgttttacctattcttttaattgctactcaatatgtttcaatggaaatcatgaaacc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcttgttttacctattcttttaattgctactcaatatgtttcaatggaaatcatgaaacc 361
Query: 840 acctcagtcaaacgaccctactcaaaagaatacacaacttattttcaagtttcttccgct 899
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 acctcggtcaaacgaccctactcaaaagaatacacaacttattttcaagtttcttccgct 421
Query: 900 catgatcggttacttctcactatctgtcccatcaggactaacaatttactggtttacgaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 catgatcggttacttctcactatctgtcccatcaggactaacaatttactggtttacgaa 481
Query: 960 caatctcctgagcacagctcaacaagtatggcttcgcaaattaggaggtgcaaaacctgt 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caatctcctgagcacagctcaacaagtatggcttcgcaaattaggaggtgcaaaacctgt 541
Query: 1020 tgtagatgaaaatgctggtggaattattact 1050
|||||||||||||||||||||||||||||||
Sbjct: 542 tgtagatgaaaatgctggtggaattattact 572
>gnl|LJGI|TC73869 similar to UniRef100_Q9FY06 Cluster: Inner membrane protein PPF-1,
chloroplast precursor; n=1; Pisum sativum|Rep: Inner
membrane protein PPF-1, chloroplast precursor - Pisum
sativum (Garden pea), partial (30%)
Length = 571
Score = 874 bits (441), Expect = 0.0
Identities = 444/445 (99%)
Strand = Plus / Plus
Query: 1 atggccaacacactcatttcttctccatctttcaccggcactccgctcccttcactccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atggccaacacactcatttcttctccatctttcaccggcactccgctcccttcactccct 186
Query: 61 cgccgccacttcccccaccgcgcggccaggctactcaccaccaaggccttccaccaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cgccgccacttcccccaccgcgcggccaggctactcaccaccaaggccttccaccaaatc 246
Query: 121 cccccaattcactccattagccattcccttgacttcgccggaatcgtcgccaggaccgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cccccaattcactccattagccattcccttgacttcgccggaatcgtcgccaggaccgaa 306
Query: 181 ggtcttctttacacgctcgccgacgccgccgtcgtcgccgttgatcctgccacgacttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggtcttctttacacgctcgccgacgccgccgtcgtcgccgttgatcctgccacgacttcc 366
Query: 241 gtcgatgctgctacacagaagaacggaggctggttcggcttcatttccgaagccatggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtcgatgctgctacacagaagaacggaggctggttcggcttcatttccgaagccatggag 426
Query: 301 tacgtgctcaaggtgttgaaggatggtctgtctgctgtgcatgtgccttactcgtatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tacgtgctcaaggtgttgaaggatggtctgtctgctgtgcatgtgccttactcgtatgga 486
Query: 361 ttcgcaatcatattgctcactgttatagttaaggccgccacgcttccattgacaaagcaa 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ttcgcaatcatatcgctcactgttatagttaaggccgccacgcttccattgacaaagcaa 546
Query: 421 caggtggaatcaacactggctatgc 445
|||||||||||||||||||||||||
Sbjct: 547 caggtggaatcaacactggctatgc 571
>gnl|LJGI|TC66666 similar to UniRef100_Q9FY06 Cluster: Inner membrane protein PPF-1,
chloroplast precursor; n=1; Pisum sativum|Rep: Inner
membrane protein PPF-1, chloroplast precursor - Pisum
sativum (Garden pea), partial (32%)
Length = 630
Score = 821 bits (414), Expect = 0.0
Identities = 417/418 (99%)
Strand = Plus / Plus
Query: 870 tacacaacttattttcaagtttcttccgctcatgatcggttacttctcactatctgtccc 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tacacaacttattttcaagtttcttccgctcatgatcggttacttctcactatctgtccc 61
Query: 930 atcaggactaacaatttactggtttacgaacaatctcctgagcacagctcaacaagtatg 989
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 62 atcaggactaacaatttactggtttacgaacaatctcctgagcacggctcaacaagtatg 121
Query: 990 gcttcgcaaattaggaggtgcaaaacctgttgtagatgaaaatgctggtggaattattac 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcttcgcaaattaggaggtgcaaaacctgttgtagatgaaaatgctggtggaattattac 181
Query: 1050 tgcaggacgggctaaaagatcagcttctcagccagcaagggctggtgaaaggtttaggca 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgcaggacgggctaaaagatcagcttctcagccagcaagggctggtgaaaggtttaggca 241
Query: 1110 gtcaaaagaagaggagaagaataagaagttaatgaaggcactgccaggggaagaacttca 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtcaaaagaagaggagaagaataagaagttaatgaaggcactgccaggggaagaacttca 301
Query: 1170 acctttggcttctgcttctgatgatggctccgatgtagaaagtgacaacaagggacagga 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acctttggcttctgcttctgatgatggctccgatgtagaaagtgacaacaagggacagga 361
Query: 1230 agatggagaagaagcttatgcctcaaaagttggtgaagaggttcaaagtttttctagg 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agatggagaagaagcttatgcctcaaaagttggtgaagaggttcaaagtttttctagg 419
>gnl|LJGI|TC64837 similar to UniRef100_Q9FY06 Cluster: Inner membrane protein PPF-1,
chloroplast precursor; n=1; Pisum sativum|Rep: Inner
membrane protein PPF-1, chloroplast precursor - Pisum
sativum (Garden pea), partial (27%)
Length = 674
Score = 712 bits (359), Expect = 0.0
Identities = 359/359 (100%)
Strand = Plus / Plus
Query: 929 catcaggactaacaatttactggtttacgaacaatctcctgagcacagctcaacaagtat 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 catcaggactaacaatttactggtttacgaacaatctcctgagcacagctcaacaagtat 61
Query: 989 ggcttcgcaaattaggaggtgcaaaacctgttgtagatgaaaatgctggtggaattatta 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggcttcgcaaattaggaggtgcaaaacctgttgtagatgaaaatgctggtggaattatta 121
Query: 1049 ctgcaggacgggctaaaagatcagcttctcagccagcaagggctggtgaaaggtttaggc 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctgcaggacgggctaaaagatcagcttctcagccagcaagggctggtgaaaggtttaggc 181
Query: 1109 agtcaaaagaagaggagaagaataagaagttaatgaaggcactgccaggggaagaacttc 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agtcaaaagaagaggagaagaataagaagttaatgaaggcactgccaggggaagaacttc 241
Query: 1169 aacctttggcttctgcttctgatgatggctccgatgtagaaagtgacaacaagggacagg 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aacctttggcttctgcttctgatgatggctccgatgtagaaagtgacaacaagggacagg 301
Query: 1229 aagatggagaagaagcttatgcctcaaaagttggtgaagaggttcaaagtttttctagg 1287
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagatggagaagaagcttatgcctcaaaagttggtgaagaggttcaaagtttttctagg 360