Miyakogusa Predicted Gene
- Lj3g3v3188400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3188400.1 tr|G7I4A4|G7I4A4_MEDTR Pectinesterase OS=Medicago
truncatula GN=MTR_1g008140 PE=3 SV=1,77.56,0,Pectin lyase-like,Pectin
lyase fold/virulence factor; Plant invertase/pectin methylesterase
inhibito,CUFF.45384.1
(1842 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78711 similar to UniRef100_A0ZNJ9 Cluster: Pectin met... 1302 0.0
gnl|LJGI|TC74905 similar to UniRef100_Q708X3 Cluster: Pectin met... 507 e-143
gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin met... 182 5e-45
gnl|LJGI|TC70814 similar to UniRef100_Q708X3 Cluster: Pectin met... 119 6e-26
gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome... 66 8e-10
gnl|LJGI|FS349507 similar to UniRef100_A7Q0F7 Cluster: Chromosom... 54 3e-06
>gnl|LJGI|TC78711 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1;
Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus
communis (Pear), partial (22%)
Length = 787
Score = 1302 bits (657), Expect = 0.0
Identities = 701/723 (96%)
Strand = Plus / Plus
Query: 1 atggacgagtacttggcaagactaggacccacagaccccggcggttcctcccgccgctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atggacgagtacttggcaagactaggacccacagaccccggcggttcctcccgccgctcc 124
Query: 61 accgctccgcttaccggttcaacaacggtggtttcaccaaattcaagcagtactaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 accgctccgcttaccggttcaacaacggtggtttcaccaaattcaagcagtactaaaaag 184
Query: 121 aagctcgtcatgcttgccgttctcgctgccatattgattgtcgcctccgtcgtctccgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aagctcgtcatgcttgccgttctcgctgccatattgattgtcgcctccgtcgtctccgcc 244
Query: 181 gtactagtcactgtcatccgctcccgcggaggctcctccgccggcgaaaactcaaacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtactagtcactgtcatccgctcccgcggaggctcctccgccggcgaaaactcaaacctc 304
Query: 241 cgcggaaagccgacgcaggcaatctcccgaacctgcagcaggacacgattccccactctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cgcggaaagccgacgcaggcaatctcccgaacctgcagcaggacacgattccccactctc 364
Query: 301 tgcatcaactctctcctcgacttccctggctccaccacagccaccgagcaggacctcgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgcatcaactctctcctcgacttccctggctccaccacagccaccgagcaggacctcgtc 424
Query: 361 cacatctccttcaacatgacccaccaccacatcagcagggcgctctacacctcctccggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cacatctccttcaacatgacccaccaccacatcagcagggcgctctacacctcctccggc 484
Query: 421 ctctcattccccgcctccgccggaacccgcgcccgcgccgcctacgaagattgccttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctctcattccccgcctccgccggaacccgcgcccgcgccgcctacgaagattgccttgag 544
Query: 481 ctcctcgacgactccatggacgnnnnnnnnnnnnnnnnnnnnnncgtcgtcgcagtcgca 540
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 545 ctcctcgacgactccatggacgctctctcccgctctctctcctccgtcgtcgcagtcgca 604
Query: 541 cctaccaacgatgagagagacggtgacggatcctccaccaccgacgatgtgctgacatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cctaccaacgatgagagagacggtgacggatcctccaccaccgacgatgtgctgacatgg 664
Query: 601 ctgagcgccgcattaactaaccaggacacgtgtttggaaggcatcgaagacgccagcggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctgagcgccgcattaactaaccaggacacgtgtttggaaggcatcgaagacgccagcggg 724
Query: 661 agcgtgaaggaccacatggtgggtaacttgaaggacttgtccgaactcgtgagtaattct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 agcgtgaaggaccacatggtgggtaacttgaaggacttgtccgaactcgtgagtaattct 784
Query: 721 cta 723
|||
Sbjct: 785 cta 787
>gnl|LJGI|TC74905 similar to UniRef100_Q708X3 Cluster: Pectin methylesterase; n=1;
Cicer arietinum|Rep: Pectin methylesterase - Cicer
arietinum (Chickpea) (Garbanzo), partial (35%)
Length = 552
Score = 507 bits (256), Expect = e-143
Identities = 266/268 (99%), Gaps = 1/268 (0%)
Strand = Plus / Plus
Query: 1576 gtgtacatgttatccaacatgagtgatcatgtgcatccacgtggatggctagagtggaat 1635
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtacatgttatcctacatgagtgatcatgtgcatccacgtggatggctagagtggaat 60
Query: 1636 ggagactttgctttagacacgttgtattatggtgagtacatgaattatggacccggtgct 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggagactttgctttagacacgttgtattatggtgagtacatgaattatggacccggtgct 120
Query: 1696 gcaatcgggcaacgggttaaatgg-cccgggtaccggattattacttcaactgttgaggc 1754
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaatcgggcaacgggttaaatggacccgggtaccggattattacttcaactgttgaggc 180
Query: 1755 tgataggttcacggtggcccaattcatatccggatcctcatggttaccgtccacaggagt 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgataggttcacggtggcccaattcatatccggatcctcatggttaccgtccacaggagt 240
Query: 1815 ggcctatttggccgggttatccacataa 1842
||||||||||||||||||||||||||||
Sbjct: 241 ggcctatttggccgggttatccacataa 268
>gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1;
Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus
communis (Pear), partial (40%)
Length = 825
Score = 182 bits (92), Expect = 5e-45
Identities = 400/502 (79%), Gaps = 3/502 (0%)
Strand = Plus / Plus
Query: 919 aacggaacggccaagacaatcgccgaggcgatcaagaaggcgccggagcatagccgccgc 978
||||||||||| ||||| |||||||| || || ||||||| ||||||| || || |||
Sbjct: 285 aacggaacggcgaagaccatcgccgaagctattaagaaggtgccggagtatggctcccgg 344
Query: 979 cgattcataatctacgtgatggcaggaaggtatgaagagaataacttaaaggtggggaaa 1038
|| ||||| |||||||| | ||||||||||||||||||||| || || ||| | |||| |
Sbjct: 345 cgtttcattatctacgtcagggcaggaaggtatgaagagaacaatttgaagatagggaga 404
Query: 1039 aagaaaaccaaccttatgttcataggggatgggaagggcaaaactgtcatcacagggaag 1098
|||| |||||| | ||| ||||||||||||| |||||||| || ||||| |||||
Sbjct: 405 aagagaaccaatgtgatgatcataggggatggaaagggcaagacagtcattacaggtggc 464
Query: 1099 aaaaatgttgttgatgggatg---accactttccataccgcatccttcgctgcaagtggt 1155
|||||||| | ||||| | ||||| || || || || ||||| ||||| ||
Sbjct: 465 aaaaatgtcatggatggcctcctcaccacatttcacactgcttcctttgctgcttcaggc 524
Query: 1156 gctggcttcattgcacgagacatcacgttcgagaactatgctggaccggcgaagcaccaa 1215
|| || ||||||||| | ||||| || || |||||||| || || |||| ||||||||||
Sbjct: 525 gcaggtttcattgcaagggacatgacttttgagaactacgccgggccggagaagcaccaa 584
Query: 1216 gcggttgcgctccgtgtcggagctgaccatgcagtggtattccggtgcaacattgtgggg 1275
||||| || |||||||||||||| ||||| || ||||| | ||| ||||| | | |||
Sbjct: 585 gcggtggccctccgtgtcggagcagaccacgcggtggtgtaccgctgcaatgtgattggg 644
Query: 1276 taccaagactcatgctatgtacactccaaccgtcaattcttccgtgaatgtgacatttat 1335
||||| ||| || ||||||||||||||||||||||||| ||| || |||||||| ||
Sbjct: 645 taccaggacacaatgtatgtacactccaaccgtcaattctaccgcgagtgtgacatctac 704
Query: 1336 ggcacggtggacttcattttcggcaacgccgccgtggttttccaaaaatgcaacatttac 1395
||||| || |||||||| ||| |||| ||||| || ||||||||||| |||| | | |||
Sbjct: 705 ggcaccgtagacttcatattcagcaatgccgcggtagttttccaaaactgcagcctctac 764
Query: 1396 gcacggaagcccatggcccaac 1417
|| || |||||||||| |||||
Sbjct: 765 gcgcgaaagcccatgggccaac 786
>gnl|LJGI|TC70814 similar to UniRef100_Q708X3 Cluster: Pectin methylesterase; n=1;
Cicer arietinum|Rep: Pectin methylesterase - Cicer
arietinum (Chickpea) (Garbanzo), partial (43%)
Length = 564
Score = 119 bits (60), Expect = 6e-26
Identities = 138/164 (84%)
Strand = Plus / Plus
Query: 1564 tactctagaacggtgtacatgttatccaacatgagtgatcatgtgcatccacgtggatgg 1623
||||||||||||||||||||| | || |||| ||||||| ||||||| |||||| |||
Sbjct: 57 tactctagaacggtgtacatgatgtcatacattggtgatcacgtgcatcaacgtgggtgg 116
Query: 1624 ctagagtggaatggagactttgctttagacacgttgtattatggtgagtacatgaattat 1683
| |||||||| | ||||||||| || || |||||||||||||||||||||||||||
Sbjct: 117 ttggagtggaacacaacctttgctttggatactttgtattatggtgagtacatgaattat 176
Query: 1684 ggacccggtgctgcaatcgggcaacgggttaaatggcccgggta 1727
|| || |||||||| | ||||||||||| || |||||||||||
Sbjct: 177 gggccgggtgctgccgttgggcaacgggtcaactggcccgggta 220
>gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 999
Score = 65.9 bits (33), Expect = 8e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 1321 gaatgtgacatttatggcacggtggacttcattttcggcaacgccgccgtggttttccaa 1380
|||||||| || |||||||| |||||||||||||| ||||| || || ||||| |||||
Sbjct: 372 gaatgtgatatctatggcactgtggacttcatttttggcaatgctgcagtggtcttccag 431
Query: 1381 aaatgcaacatttacgc 1397
|| |||||||| |||||
Sbjct: 432 aactgcaacatctacgc 448
>gnl|LJGI|FS349507 similar to UniRef100_A7Q0F7 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 684
Score = 54.0 bits (27), Expect = 3e-06
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 1317 ccgtgaatgtgacatttatggcacggtggacttcattttcggcaacgccgccgtggtttt 1376
||||||||||||||| |||||||| || || ||||| || || || ||||| || |||||
Sbjct: 630 ccgtgaatgtgacatctatggcacagttgatttcatatttggaaatgccgctgttgtttt 571
Query: 1377 ccaaaaatgcaacat 1391
||||| ||||||||
Sbjct: 570 ccaaacttgcaacat 556