Miyakogusa Predicted Gene
- Lj3g3v3177310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3177310.1 tr|F2E038|F2E038_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,68.85,1e-17,coiled-coil,NULL,CUFF.45381.1
(1077 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60640 similar to UniRef100_A7NZ47 Cluster: Chromosome... 1142 0.0
gnl|LJGI|TC68524 similar to UniRef100_Q9ASR8 Cluster: AT5g59960/... 720 0.0
gnl|LJGI|FS342091 similar to UniRef100_A7NZ47 Cluster: Chromosom... 571 e-162
gnl|LJGI|TC74485 similar to UniRef100_A7NZ47 Cluster: Chromosome... 410 e-114
gnl|LJGI|TC58938 similar to UniRef100_Q9ASR8 Cluster: AT5g59960/... 84 2e-15
>gnl|LJGI|TC60640 similar to UniRef100_A7NZ47 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 822
Score = 1142 bits (576), Expect = 0.0
Identities = 576/576 (100%)
Strand = Plus / Plus
Query: 1 atgaccgaagctcattccccgccgcgaacctccgcgtatctcgacgctctctgccaagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atgaccgaagctcattccccgccgcgaacctccgcgtatctcgacgctctctgccaagcg 306
Query: 61 atccacaagaagctccagcgggcactcgcaaattcttcgcagaggcgcaatttgctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atccacaagaagctccagcgggcactcgcaaattcttcgcagaggcgcaatttgctgcag 366
Query: 121 gagctcttcgccgacgtagctttggaagttgatgaccgagccaaagatgtaattgtgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gagctcttcgccgacgtagctttggaagttgatgaccgagccaaagatgtaattgtgaac 426
Query: 181 aaggaagaagatgcgatttcttctgcagagtatgtgaatgatggtccgttgtgtttctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aaggaagaagatgcgatttcttctgcagagtatgtgaatgatggtccgttgtgtttctat 486
Query: 241 gatgtgcttgctgattattttgtacgagttcctgagagtggcaaacctatccttgacatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gatgtgcttgctgattattttgtacgagttcctgagagtggcaaacctatccttgacatg 546
Query: 301 attgttcaactctggagtcaatcatttgcttcacatatatttgctctcctctttcacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 attgttcaactctggagtcaatcatttgcttcacatatatttgctctcctctttcacaaa 606
Query: 361 tggctatttgaagttcatcttgataatccagacgtgctcctccggtattcatctgctctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tggctatttgaagttcatcttgataatccagacgtgctcctccggtattcatctgctctg 666
Query: 421 gttcaaggagccacaaatgttttctggattgacattcaaacaaatacaaggcgtttccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gttcaaggagccacaaatgttttctggattgacattcaaacaaatacaaggcgtttccaa 726
Query: 481 tctctattccgttacctcttggatgatgttgcattacaccacagtcgattgaataaaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tctctattccgttacctcttggatgatgttgcattacaccacagtcgattgaataaaatt 786
Query: 541 cctgtccaggctcaacgagatatgtatcttttgctc 576
||||||||||||||||||||||||||||||||||||
Sbjct: 787 cctgtccaggctcaacgagatatgtatcttttgctc 822
>gnl|LJGI|TC68524 similar to UniRef100_Q9ASR8 Cluster: AT5g59960/mmn10_180; n=1;
Arabidopsis thaliana|Rep: AT5g59960/mmn10_180 -
Arabidopsis thaliana (Mouse-ear cress), partial (53%)
Length = 797
Score = 720 bits (363), Expect = 0.0
Identities = 363/363 (100%)
Strand = Plus / Plus
Query: 1 atgaccgaagctcattccccgccgcgaacctccgcgtatctcgacgctctctgccaagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atgaccgaagctcattccccgccgcgaacctccgcgtatctcgacgctctctgccaagcg 417
Query: 61 atccacaagaagctccagcgggcactcgcaaattcttcgcagaggcgcaatttgctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atccacaagaagctccagcgggcactcgcaaattcttcgcagaggcgcaatttgctgcag 477
Query: 121 gagctcttcgccgacgtagctttggaagttgatgaccgagccaaagatgtaattgtgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gagctcttcgccgacgtagctttggaagttgatgaccgagccaaagatgtaattgtgaac 537
Query: 181 aaggaagaagatgcgatttcttctgcagagtatgtgaatgatggtccgttgtgtttctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 aaggaagaagatgcgatttcttctgcagagtatgtgaatgatggtccgttgtgtttctat 597
Query: 241 gatgtgcttgctgattattttgtacgagttcctgagagtggcaaacctatccttgacatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gatgtgcttgctgattattttgtacgagttcctgagagtggcaaacctatccttgacatg 657
Query: 301 attgttcaactctggagtcaatcatttgcttcacatatatttgctctcctctttcacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 attgttcaactctggagtcaatcatttgcttcacatatatttgctctcctctttcacaaa 717
Query: 361 tgg 363
|||
Sbjct: 718 tgg 720
>gnl|LJGI|FS342091 similar to UniRef100_A7NZ47 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 784
Score = 571 bits (288), Expect = e-162
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 81 ggcactcgcaaattcttcgcagaggcgcaatttgctgcaggagctcttcgccgacgtagc 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggcactcgcaaattcttcgcagaggcgcaatttgctgcaggagctcttcgccgacgtagc 556
Query: 141 tttggaagttgatgaccgagccaaagatgtaattgtgaacaaggaagaagatgcgatttc 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttggaagttgatgaccgagccaaagatgtaattgtgaacaaggaagaagatgcgatttc 616
Query: 201 ttctgcagagtatgtgaatgatggtccgttgtgtttctatgatgtgcttgctgattattt 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttctgcagagtatgtgaatgatggtccgttgtgtttctatgatgtgcttgctgattattt 676
Query: 261 tgtacgagttcctgagagtggcaaacctatccttgacatgattgttcaactctggagtca 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgtacgagttcctgagagtggcaaacctatccttgacatgattgttcaactctggagtca 736
Query: 321 atcatttgcttcacatatatttgctctcctctttcacaaatggctatt 368
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 atcatttgcttcacatatatttgctctcctctttcacaaatggctatt 784
Score = 163 bits (82), Expect = 3e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 atgaccgaagctcattccccgccgcgaacctccgcgtatctcgacgctctctgccaagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgaccgaagctcattccccgccgcgaacctccgcgtatctcgacgctctctgccaagcg 326
Query: 61 atccacaagaagctccagcggg 82
||||||||||||||||||||||
Sbjct: 327 atccacaagaagctccagcggg 348
>gnl|LJGI|TC74485 similar to UniRef100_A7NZ47 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (20%)
Length = 549
Score = 410 bits (207), Expect = e-114
Identities = 219/223 (98%)
Strand = Plus / Plus
Query: 855 tagagctgttcgtcatgctgcctgggatgcattagattttctctttccggtgggacaata 914
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 tagagctgttcgtcatgctgcctgggatgcattagattttctctttccggtgggaccata 60
Query: 915 ccctcgacatctcataagtctattcttcaggttgctctatccatggtattggccctcgtc 974
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 ccctcgacatctcataagtctattcttcaggttgctctatccctggtattggccctcgtc 120
Query: 975 ctgttggtactttgcaatttcttgcctccaggcaatttttaactccttgctgaggttgat 1034
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgttggtactttgccatttcttgcctccaggcaatttttaactccttgctgaggttgat 180
Query: 1035 attttcttcgtgggagaagattgccaagccaaaatcacaatag 1077
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 attttcttcgtgggagaagattgccaagcccaaatcacaatag 223
>gnl|LJGI|TC58938 similar to UniRef100_Q9ASR8 Cluster: AT5g59960/mmn10_180; n=1;
Arabidopsis thaliana|Rep: AT5g59960/mmn10_180 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 1094
Score = 83.8 bits (42), Expect = 2e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 141 tttggaagttgatgaccgagccaaagatgtaattgtgaacaaggaagaagatgc 194
||||||||| ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 103 tttggaagtcgatgatcgagccaaagatgtaattgtcaacaaggaagaagatgc 156