Miyakogusa Predicted Gene
- Lj3g3v3176250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3176250.1 Non Chatacterized Hit- tr|C6SZN8|C6SZN8_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,67.8,0.0000000000005,seg,NULL,CUFF.45393.1
(435 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70457 homologue to UniRef100_A5BCC0 Cluster: Histone ... 434 e-121
gnl|LJGI|TC67774 homologue to UniRef100_Q2XPW1 Cluster: Histone ... 311 2e-84
gnl|LJGI|GO010214 homologue to UniRef100_Q1S9I9 Cluster: Probabl... 293 5e-79
gnl|LJGI|BW599482 homologue to UniRef100_A2IBL2 Cluster: Histone... 293 5e-79
gnl|LJGI|TC71116 homologue to UniRef100_Q1S9I9 Cluster: Probable... 293 5e-79
gnl|LJGI|TC65926 homologue to UniRef100_A2IBL2 Cluster: Histone ... 285 1e-76
gnl|LJGI|TC72485 similar to UniRef100_O22582 Cluster: Histone H2... 167 7e-41
gnl|LJGI|TC71812 homologue to UniRef100_Q9FFC0 Cluster: Histone ... 167 7e-41
gnl|LJGI|TC66051 homologue to UniRef100_Q2XPW1 Cluster: Histone ... 159 2e-38
gnl|LJGI|TC74341 homologue to UniRef100_A5BCC0 Cluster: Histone ... 151 4e-36
gnl|LJGI|TC71112 homologue to UniRef100_A5BCC0 Cluster: Histone ... 151 4e-36
gnl|LJGI|TC60768 homologue to UniRef100_Q9M3H6 Cluster: Histone ... 149 2e-35
gnl|LJGI|TC73557 homologue to UniRef100_Q9M3H6 Cluster: Histone ... 105 2e-22
gnl|LJGI|BW599629 similar to UniRef100_A2IBL2 Cluster: Histone H... 100 1e-20
>gnl|LJGI|TC70457 homologue to UniRef100_A5BCC0 Cluster: Histone H2B; n=1; Vitis
vinifera|Rep: Histone H2B - Vitis vinifera (Grape),
partial (93%)
Length = 713
Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Minus
Query: 217 gtctccggcagcggctgcgccctccttgggaagcttcttcccggccttgggtttcttctc 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gtctccggcagcggctgcgccctccttgggaagcttcttcccggccttgggtttcttctc 162
Query: 277 cgccgggggagccttctcggccaccgtcgacttcttctcctccgcgggcttcttgtctgc 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 cgccgggggagccttctcggccaccgtcgacttcttctcctccgcgggcttcttgtctgc 102
Query: 337 cttgggtgccatcacgaattgggaaaaaagattctagggtttgaaattggaattgagatc 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 cttgggtgccatcacgaattgggaaaaaagattctagggtttgaaattggaattgagatc 42
Query: 397 gcggattgggaacagagaattaattgggttttcgttgaa 435
|||||||||||||||||||||||||||||||||||||||
Sbjct: 41 gcggattgggaacagagaattaattgggttttcgttgaa 3
Score = 359 bits (181), Expect = 9e-99
Identities = 181/181 (100%)
Strand = Plus / Minus
Query: 1 atgcttggccaattctccgggcagaacaagcctgaccgcggtctggatttccctggaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atgcttggccaattctccgggcagaacaagcctgaccgcggtctggatttccctggaagt 417
Query: 61 gatggtgggcttcttgttgtagcgggcaagcctggaggattcctgagcgagcttctcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gatggtgggcttcttgttgtagcgggcaagcctggaggattcctgagcgagcttctcgaa 357
Query: 121 gatgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gatgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtctgg 297
Query: 181 g 181
|
Sbjct: 296 g 296
>gnl|LJGI|TC67774 homologue to UniRef100_Q2XPW1 Cluster: Histone H2B-like protein;
n=1; Solanum tuberosum|Rep: Histone H2B-like protein -
Solanum tuberosum (Potato), partial (97%)
Length = 695
Score = 311 bits (157), Expect = 2e-84
Identities = 175/181 (96%)
Strand = Plus / Minus
Query: 1 atgcttggccaattctccgggcagaacaagcctgaccgcggtctggatttccctggaagt 60
|||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 468 atgcttggccaattctccgggcagcacgagcctgaccgcggtctggatctccctggaagt 409
Query: 61 gatggtgggcttcttgttgtagcgggcaagcctggaggattcctgagcgagcttctcgaa 120
|||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 408 gatggtgggcttcttgttgtagcgagcgagcctggaagattcctgagcgagcttctcgaa 349
Query: 121 gatgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gatgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtctgg 289
Query: 181 g 181
|
Sbjct: 288 g 288
Score = 168 bits (85), Expect = 2e-41
Identities = 112/121 (92%)
Strand = Plus / Minus
Query: 217 gtctccggcagcggctgcgccctccttgggaagcttcttcccggccttgggtttcttctc 276
||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 213 gtctccggcggcgcttgcgccctcctttggaagcttcttcccggccttgggcttcttctc 154
Query: 277 cgccgggggagccttctcggccaccgtcgacttcttctcctccgcgggcttcttgtctgc 336
|||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 153 cgccggtggagccttctcggccgccgtcgacttcttctcctcagcgggcttcttctctgc 94
Query: 337 c 337
|
Sbjct: 93 c 93
>gnl|LJGI|GO010214 homologue to UniRef100_Q1S9I9 Cluster: Probable histone H2B.1; n=1;
Medicago truncatula|Rep: Probable histone H2B.1 -
Medicago truncatula (Barrel medic), partial (74%)
Length = 612
Score = 293 bits (148), Expect = 5e-79
Identities = 172/180 (95%)
Strand = Plus / Minus
Query: 2 tgcttggccaattctccgggcagaacaagcctgaccgcggtctggatttccctggaagtg 61
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgcttagccaactctccgggcagcacaagcctgaccgcggtctggatttccctggaagtg 309
Query: 62 atggtgggcttcttgttgtagcgggcaagcctggaggattcctgagcgagcttctcgaag 121
|||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 308 atggtgggtttcttgttgtagcgagcgagcctggaagattcctgagcgagcttctcgaag 249
Query: 122 atgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtctggg 181
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atgtcgttgatgaagctgttcatgatccccatggccttgctggagataccgatgtctggg 189
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 309 tcttctcctccgcgggcttcttgtctgccttgggtgccatcacgaattg 357
|||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 127 tcttcttctccgcgggcttcttgtctgccttgggtgccatcacaaattg 79
>gnl|LJGI|BW599482 homologue to UniRef100_A2IBL2 Cluster: Histone H2B; n=1; Nicotiana
benthamiana|Rep: Histone H2B - Nicotiana benthamiana,
partial (54%)
Length = 468
Score = 293 bits (148), Expect = 5e-79
Identities = 172/180 (95%)
Strand = Plus / Minus
Query: 2 tgcttggccaattctccgggcagaacaagcctgaccgcggtctggatttccctggaagtg 61
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgcttagccaactctccgggcagcacaagcctgaccgcggtctggatttccctggaagtg 388
Query: 62 atggtgggcttcttgttgtagcgggcaagcctggaggattcctgagcgagcttctcgaag 121
|||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 387 atggtgggtttcttgttgtagcgagcgagcctggaagattcctgagcgagcttctcgaag 328
Query: 122 atgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtctggg 181
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atgtcgttgatgaagctgttcatgatccccatggccttgctggagataccgatgtctggg 268
>gnl|LJGI|TC71116 homologue to UniRef100_Q1S9I9 Cluster: Probable histone H2B.1; n=1;
Medicago truncatula|Rep: Probable histone H2B.1 -
Medicago truncatula (Barrel medic), complete
Length = 792
Score = 293 bits (148), Expect = 5e-79
Identities = 172/180 (95%)
Strand = Plus / Minus
Query: 2 tgcttggccaattctccgggcagaacaagcctgaccgcggtctggatttccctggaagtg 61
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgcttagccaactctccgggcagcacaagcctgaccgcggtctggatttccctggaagtg 439
Query: 62 atggtgggcttcttgttgtagcgggcaagcctggaggattcctgagcgagcttctcgaag 121
|||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 438 atggtgggtttcttgttgtagcgagcgagcctggaagattcctgagcgagcttctcgaag 379
Query: 122 atgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtctggg 181
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atgtcgttgatgaagctgttcatgatccccatggccttgctggagataccgatgtctggg 319
Score = 202 bits (102), Expect = 1e-51
Identities = 111/114 (97%)
Strand = Plus / Minus
Query: 217 gtctccggcagcggctgcgccctccttgggaagcttcttcccggccttgggtttcttctc 276
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 244 gtctccggcagcggctgcgccctccttgggaagcttcttcccggccttgggcttcttctc 185
Query: 277 cgccgggggagccttctcggccaccgtcgacttcttctcctccgcgggcttctt 330
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 184 cgccgggggagccttctcagccaccgtcgacttcttctcctcggcgggcttctt 131
>gnl|LJGI|TC65926 homologue to UniRef100_A2IBL2 Cluster: Histone H2B; n=1; Nicotiana
benthamiana|Rep: Histone H2B - Nicotiana benthamiana,
partial (80%)
Length = 634
Score = 285 bits (144), Expect = 1e-76
Identities = 171/180 (95%)
Strand = Plus / Minus
Query: 2 tgcttggccaattctccgggcagaacaagcctgaccgcggtctggatttccctggaagtg 61
||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 391 tgcttagccaactctccgggcagcgcaagcctgaccgcggtctggatttccctggaagtg 332
Query: 62 atggtgggcttcttgttgtagcgggcaagcctggaggattcctgagcgagcttctcgaag 121
|||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 331 atggtgggtttcttgttgtagcgagcgagcctggaagattcctgagcgagcttctcgaag 272
Query: 122 atgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtctggg 181
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atgtcgttgatgaagctgttcatgatccccatggccttgctggagataccgatgtctggg 212
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 310 cttctcctccgcgggcttcttgtctgccttgggtgccatcacgaattg 357
||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 126 cttcttctccgcgggcttcttgtctgccttgggtgccatcacaaattg 79
>gnl|LJGI|TC72485 similar to UniRef100_O22582 Cluster: Histone H2B; n=1; Gossypium
hirsutum|Rep: Histone H2B - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (91%)
Length = 490
Score = 167 bits (84), Expect = 7e-41
Identities = 126/140 (90%)
Strand = Plus / Minus
Query: 38 gcggtctggatttccctggaagtgatggtgggcttcttgttgtagcgggcaagcctggag 97
|||||||| || |||| |||||| || || ||||||||||||||||| ||||| | ||
Sbjct: 435 gcggtctgaatctcccgggaagtaatcgtcggcttcttgttgtagcgagcaagacaagac 376
Query: 98 gattcctgagcgagcttctcgaagatgtcgttgatgaaactgttcatgatccccatggcc 157
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 375 gactcctgagcgagcttctcgaagatgtcgttgatgaaactgttcatgattcccatggcc 316
Query: 158 ttgctggagataccgatgtc 177
||||||||||| ||||||||
Sbjct: 315 ttgctggagattccgatgtc 296
>gnl|LJGI|TC71812 homologue to UniRef100_Q9FFC0 Cluster: Histone H2B.10; n=2;
Arabidopsis thaliana|Rep: Histone H2B.10 - Arabidopsis
thaliana (Mouse-ear cress), partial (97%)
Length = 707
Score = 167 bits (84), Expect = 7e-41
Identities = 126/140 (90%)
Strand = Plus / Minus
Query: 38 gcggtctggatttccctggaagtgatggtgggcttcttgttgtagcgggcaagcctggag 97
|||||||| || |||||||| ||||| || ||||||||||||||||| || || | ||
Sbjct: 466 gcggtctgaatctccctggaggtgatcgtcggcttcttgttgtagcgagccagacgagaa 407
Query: 98 gattcctgagcgagcttctcgaagatgtcgttgatgaaactgttcatgatccccatggcc 157
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 406 gactcctgagcgagcttctcgaagatgtcattgatgaaactgttcatgatccccatggcc 347
Query: 158 ttgctggagataccgatgtc 177
||||||||||| ||||||||
Sbjct: 346 ttgctggagattccgatgtc 327
>gnl|LJGI|TC66051 homologue to UniRef100_Q2XPW1 Cluster: Histone H2B-like protein;
n=1; Solanum tuberosum|Rep: Histone H2B-like protein -
Solanum tuberosum (Potato), partial (96%)
Length = 633
Score = 159 bits (80), Expect = 2e-38
Identities = 107/116 (92%)
Strand = Plus / Minus
Query: 62 atggtgggcttcttgttgtagcgggcaagcctggaggattcctgagcgagcttctcgaag 121
||||| |||||||||||||| | ||| |||||||| ||||||||||| ||||||||||||
Sbjct: 364 atggtaggcttcttgttgtacctggcgagcctggaagattcctgagcaagcttctcgaag 305
Query: 122 atgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtc 177
|||||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct: 304 atgtcgttgatgaagctgttcatgatccccatggccttgctggagattccaatgtc 249
>gnl|LJGI|TC74341 homologue to UniRef100_A5BCC0 Cluster: Histone H2B; n=1; Vitis
vinifera|Rep: Histone H2B - Vitis vinifera (Grape),
partial (86%)
Length = 495
Score = 151 bits (76), Expect = 4e-36
Identities = 124/140 (88%)
Strand = Plus / Minus
Query: 38 gcggtctggatttccctggaagtgatggtgggcttcttgttgtagcgggcaagcctggag 97
|||||||| || |||||||| || || || ||||||||||||||||| ||||| | ||
Sbjct: 402 gcggtctgaatctccctggaggtaatcgtcggcttcttgttgtagcgagcaagacgagaa 343
Query: 98 gattcctgagcgagcttctcgaagatgtcgttgatgaaactgttcatgatccccatggcc 157
|| |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 342 gactcctgagcgagcttctcgaagatgtcattgatgaagctgttcatgattcccatggcc 283
Query: 158 ttgctggagataccgatgtc 177
||||||||||| ||||||||
Sbjct: 282 ttgctggagattccgatgtc 263
>gnl|LJGI|TC71112 homologue to UniRef100_A5BCC0 Cluster: Histone H2B; n=1; Vitis
vinifera|Rep: Histone H2B - Vitis vinifera (Grape),
partial (68%)
Length = 536
Score = 151 bits (76), Expect = 4e-36
Identities = 124/140 (88%)
Strand = Plus / Minus
Query: 38 gcggtctggatttccctggaagtgatggtgggcttcttgttgtagcgggcaagcctggag 97
|||||||| || |||||||| || || || ||||||||||||||||| ||||| | ||
Sbjct: 288 gcggtctgaatctccctggaggtaatcgtcggcttcttgttgtagcgagcaagacgagaa 229
Query: 98 gattcctgagcgagcttctcgaagatgtcgttgatgaaactgttcatgatccccatggcc 157
|| |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 228 gactcctgagcgagcttctcgaagatgtcattgatgaagctgttcatgattcccatggcc 169
Query: 158 ttgctggagataccgatgtc 177
||||||||||| ||||||||
Sbjct: 168 ttgctggagattccgatgtc 149
>gnl|LJGI|TC60768 homologue to UniRef100_Q9M3H6 Cluster: Histone H2B; n=1; Cicer
arietinum|Rep: Histone H2B - Cicer arietinum (Chickpea)
(Garbanzo), complete
Length = 758
Score = 149 bits (75), Expect = 2e-35
Identities = 108/119 (90%)
Strand = Plus / Minus
Query: 59 gtgatggtgggcttcttgttgtagcgggcaagcctggaggattcctgagcgagcttctcg 118
||||| || ||||||||||||||||| || ||||| || || ||||||||||||||||||
Sbjct: 385 gtgatcgtaggcttcttgttgtagcgagcgagcctagaagactcctgagcgagcttctcg 326
Query: 119 aagatgtcgttgatgaaactgttcatgatccccatggccttgctggagataccgatgtc 177
|||||||| |||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct: 325 aagatgtcattgatgaagctgttcatgatccccatggccttgctggagattccaatgtc 267
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 250 cttcttcccggccttgggtttcttctccgccgggg 284
||||||| |||||||||||||||||||||||||||
Sbjct: 164 cttcttctcggccttgggtttcttctccgccgggg 130
>gnl|LJGI|TC73557 homologue to UniRef100_Q9M3H6 Cluster: Histone H2B; n=1; Cicer
arietinum|Rep: Histone H2B - Cicer arietinum (Chickpea)
(Garbanzo), partial (91%)
Length = 522
Score = 105 bits (53), Expect = 2e-22
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 41 gtctggatttccctggaagtgatggtgggcttcttgttgtagcgggcaagcctggaggat 100
||||| || ||||| || |||||||| |||||||||||||| | ||||| || || ||
Sbjct: 381 gtctgaatctccctcgaggtgatggtaggcttcttgttgtacctcgcaagtctcgaagac 322
Query: 101 tcctgagcgagcttctcgaagatgtcgttgatgaaactgttcatgatccccatggccttg 160
|||||||| |||||||| ||||| || |||||||| || |||||||||||||| ||||||
Sbjct: 321 tcctgagcaagcttctcaaagatatcattgatgaagctattcatgatccccatagccttg 262
Query: 161 ctggagataccgatgtc 177
|||||||| || |||||
Sbjct: 261 ctggagattccaatgtc 245
>gnl|LJGI|BW599629 similar to UniRef100_A2IBL2 Cluster: Histone H2B; n=1; Nicotiana
benthamiana|Rep: Histone H2B - Nicotiana benthamiana,
partial (37%)
Length = 486
Score = 99.6 bits (50), Expect = 1e-20
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 1 atgcttggccaattctccgggcagaacaagcctgaccgcggtctggattt 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atgcttggccaattctccgggcagaacaagcctgaccgcggtctggattt 384