Miyakogusa Predicted Gene

Lj3g3v3165180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3165180.1 Non Chatacterized Hit- tr|I1IJ83|I1IJ83_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.01,0.0000000000002,UNCHARACTERIZED,Harbinger
transposase-derived nuclease; DDE_4,NULL,CUFF.45365.1
         (1170 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036207 similar to UniRef100_A2Q269 Cluster: Trp repre...   220   2e-56
gnl|LJGI|TC73106 similar to UniRef100_A7QX90 Cluster: Chromosome...   212   4e-54
gnl|LJGI|TC65264 similar to UniRef100_A2Q269 Cluster: Trp repres...   204   9e-52
gnl|LJGI|BP062940                                                      82   9e-15
gnl|LJGI|TC78724 homologue to UniRef100_A7QAX6 Cluster: Chromoso...    80   4e-14
gnl|LJGI|GO030889 weakly similar to UniRef100_A7PIZ9 Cluster: Ch...    60   3e-08

>gnl|LJGI|GO036207 similar to UniRef100_A2Q269 Cluster: Trp repressor/replication
           initiator; n=1; Medicago truncatula|Rep: Trp
           repressor/replication initiator - Medicago truncatula
           (Barrel medic), partial (11%)
          Length = 688

 Score =  220 bits (111), Expect = 2e-56
 Identities = 205/234 (87%), Gaps = 13/234 (5%)
 Strand = Plus / Plus

                                                                       
Query: 457 tttgggaaactacaaagcctccctaactgttgcggtgtagttgatgtcacacacatcaac 516
           |||| |||||||||| ||||||| || || || |||||||||||||| ||||||||||| 
Sbjct: 413 tttgagaaactacaaggcctcccaaattgctgtggtgtagttgatgttacacacatcaa- 471

                                                                       
Query: 517 atgtgtttagcttccacagagcctaataaagatgtgtggcttgaccatgagaataaacat 576
            ||||||||||||| ||| | ||| |||| || |||||||||||||||||||| ||||||
Sbjct: 472 -tgtgtttagcttctacataacctcataaggaagtgtggcttgaccatgagaagaaacat 530

                                                                       
Query: 577 agcatggtcttgcaagcaatagtggatcctg-atatgaggttcagagacatagtcactgg 635
           |||||||||        |||||||||||||| ||||||||||||||||||  ||||||||
Sbjct: 531 agcatggtc--------aatagtggatcctggatatgaggttcagagaca--gtcactgg 580

                                                                 
Query: 636 ttggccaggtcaaatgaaggattggatggtctttgaggattcaactttccacaa 689
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttggccaggtcatttgaaggattggatggtctttgaggattcaactttccacaa 634


>gnl|LJGI|TC73106 similar to UniRef100_A7QX90 Cluster: Chromosome undetermined
            scaffold_215, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_215, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (14%)
          Length = 1300

 Score =  212 bits (107), Expect = 4e-54
 Identities = 204/234 (87%), Gaps = 13/234 (5%)
 Strand = Plus / Plus

                                                                        
Query: 457  tttgggaaactacaaagcctccctaactgttgcggtgtagttgatgtcacacacatcaac 516
            |||| |||||||||| ||||||| || || || |||||||||||||| ||||||||||| 
Sbjct: 842  tttgagaaactacaaggcctcccaaattgctgtggtgtagttgatgttacacacatcaa- 900

                                                                        
Query: 517  atgtgtttagcttccacagagcctaataaagatgtgtggcttgaccatgagaataaacat 576
             ||||||||||||| ||| | ||| |||| || |||||||||||||||||||| ||||||
Sbjct: 901  -tgtgtttagcttctacataacctcataaggaagtgtggcttgaccatgagaagaaacat 959

                                                                        
Query: 577  agcatggtcttgcaagcaatagtggatcctg-atatgaggttcagagacatagtcactgg 635
            |||||||||        |||||||||||||| |||||||||||||||||   ||||||||
Sbjct: 960  agcatggtc--------aatagtggatcctggatatgaggttcagagacc--gtcactgg 1009

                                                                  
Query: 636  ttggccaggtcaaatgaaggattggatggtctttgaggattcaactttccacaa 689
            ||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 ttggccaggtcatttgaaggattggatggtctttgaggattcaactttccacaa 1063


>gnl|LJGI|TC65264 similar to UniRef100_A2Q269 Cluster: Trp repressor/replication
           initiator; n=1; Medicago truncatula|Rep: Trp
           repressor/replication initiator - Medicago truncatula
           (Barrel medic), partial (6%)
          Length = 1034

 Score =  204 bits (103), Expect = 9e-52
 Identities = 203/234 (86%), Gaps = 13/234 (5%)
 Strand = Plus / Plus

                                                                       
Query: 457 tttgggaaactacaaagcctccctaactgttgcggtgtagttgatgtcacacacatcaac 516
           |||| |||||||||| ||||||| || || || |||||||||||||| ||||||||||| 
Sbjct: 580 tttgagaaactacaaggcctcccaaattgctgtggtgtagttgatgttacacacatcaa- 638

                                                                       
Query: 517 atgtgtttagcttccacagagcctaataaagatgtgtggcttgaccatgagaataaacat 576
            ||||||||||||| ||| | ||| |||| || |||||||||| ||||||||| ||||||
Sbjct: 639 -tgtgtttagcttctacataacctcataaggaagtgtggcttggccatgagaagaaacat 697

                                                                       
Query: 577 agcatggtcttgcaagcaatagtggatcctg-atatgaggttcagagacatagtcactgg 635
           |||||||||        |||||||||||||| ||||||||||||||||||  ||||||||
Sbjct: 698 agcatggtc--------aatagtggatcctggatatgaggttcagagaca--gtcactgg 747

                                                                 
Query: 636 ttggccaggtcaaatgaaggattggatggtctttgaggattcaactttccacaa 689
           ||||||||||||  |||| |||||||||||||||||||||||||||||||||||
Sbjct: 748 ttggccaggtcatttgaatgattggatggtctttgaggattcaactttccacaa 801


>gnl|LJGI|BP062940 
          Length = 375

 Score = 81.8 bits (41), Expect = 9e-15
 Identities = 81/92 (88%), Gaps = 3/92 (3%)
 Strand = Plus / Minus

                                                                       
Query: 595 atagtggatcctg-atatgaggttcagagacatagtcactggttggccaggtcaaatgaa 653
           ||||||||||||| ||||||||||| |||||    ||||||||||||| ||||   ||||
Sbjct: 334 atagtggatcctggatatgaggttccgagaccc--tcactggttggcccggtcctttgaa 277

                                           
Query: 654 ggattggatggtctttgaggattcaactttcc 685
           |||||||||||||||||||||||| |||||||
Sbjct: 276 ggattggatggtctttgaggattccactttcc 245


>gnl|LJGI|TC78724 homologue to UniRef100_A7QAX6 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (3%)
          Length = 738

 Score = 79.8 bits (40), Expect = 4e-14
 Identities = 88/103 (85%), Gaps = 2/103 (1%)
 Strand = Plus / Plus

                                                                       
Query: 457 tttgggaaactacaaagcctccctaactgttgcggtgtagttgatgtcacacacatcaac 516
           |||| |||||||||| ||||||| || || || |||||||||||||| ||||||||||  
Sbjct: 637 tttgagaaactacaaggcctcccaaattgctgtggtgtagttgatgttacacacatca-- 694

                                                      
Query: 517 atgtgtttagcttccacagagcctaataaagatgtgtggcttg 559
           |||||||||||||| ||| | ||| |||| || ||||||||||
Sbjct: 695 atgtgtttagcttctacataacctcataaggaagtgtggcttg 737


>gnl|LJGI|GO030889 weakly similar to UniRef100_A7PIZ9 Cluster: Chromosome chr13
            scaffold_17, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (45%)
          Length = 618

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 977  tccttgtttgctgcatacttcacaacatagtgattgatatgg 1018
            ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 260  tccttgtttgctgcatactgcataatatagtgattgatatgg 219