Miyakogusa Predicted Gene
- Lj3g3v3165170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3165170.1 Non Chatacterized Hit- tr|J3L5N2|J3L5N2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G4,37.69,0.000000008,coiled-coil,NULL; seg,NULL; FAMILY NOT
NAMED,NULL; DUF966,Protein of unknown function DUF966,CUFF.45370.1
(1275 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598997 similar to UniRef100_Q945F5 Cluster: Auxin-reg... 531 e-150
gnl|LJGI|BP034539 weakly similar to UniRef100_A7NZ65 Cluster: Ch... 470 e-131
gnl|LJGI|BP081121 similar to UniRef100_A7NZ65 Cluster: Chromosom... 428 e-119
gnl|LJGI|TC77064 weakly similar to UniRef100_Q9KB98 Cluster: BH2... 323 2e-87
>gnl|LJGI|DC598997 similar to UniRef100_Q945F5 Cluster: Auxin-regulated protein; n=1;
Solanum lycopersicum|Rep: Auxin-regulated protein -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum),
partial (16%)
Length = 422
Score = 531 bits (268), Expect = e-150
Identities = 273/275 (99%)
Strand = Plus / Plus
Query: 1 atgtcggtcagttccagttccagttccagttccaggggaagaagaataaccaccacaacg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atgtcggtcngttccagttccagttccagttccaggggaagaagaataaccaccacaacg 207
Query: 61 gacagagaaaccagcccagagagaaccagagtctggaccgaacccaaacccaaaaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gacagagaaaccagcccagagagaaccagagtctggaccgaacccaaacccaaaaccacc 267
Query: 121 agaagagtctccgtcgtttactacctctcccgtaacggccagcttgaacaccctcatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agaagagtctccgtcgtttactacctctcccgtaacggccagcttgaacaccctcatttc 327
Query: 181 atggaggtttctctctcctcccctcacggcctccacctcaaagacgtaatcgatcgattg 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 328 atggaggtttctctctcctcccctcacggactccacctcaaagacgtaatcgatcgattg 387
Query: 241 aaccagctacgagggaaaggcatggctactatgta 275
|||||||||||||||||||||||||||||||||||
Sbjct: 388 aaccagctacgagggaaaggcatggctactatgta 422
>gnl|LJGI|BP034539 weakly similar to UniRef100_A7NZ65 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (41%)
Length = 410
Score = 470 bits (237), Expect = e-131
Identities = 237/237 (100%)
Strand = Plus / Minus
Query: 879 ggagagtggagccggggcagggaaagatcaagggttctcgttggttgggcactacaagtc 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ggagagtggagccggggcagggaaagatcaagggttctcgttggttgggcactacaagtc 351
Query: 939 aagattgccccgcggagcagggaatcatgggggaaaggaggtggggacattgatggaaat 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aagattgccccgcggagcagggaatcatgggggaaaggaggtggggacattgatggaaat 291
Query: 999 tccagatttgagcagggtgagattggaagacaaagagtattttagtggtagcttgattga 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tccagatttgagcagggtgagattggaagacaaagagtattttagtggtagcttgattga 231
Query: 1059 aactcaaaaagtggaaaccccttctttgaaaaggtccaattcttacaatgcagacag 1115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aactcaaaaagtggaaaccccttctttgaaaaggtccaattcttacaatgcagacag 174
>gnl|LJGI|BP081121 similar to UniRef100_A7NZ65 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (17%)
Length = 473
Score = 428 bits (216), Expect = e-119
Identities = 216/216 (100%)
Strand = Plus / Minus
Query: 1060 actcaaaaagtggaaaccccttctttgaaaaggtccaattcttacaatgcagacagcggt 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 actcaaaaagtggaaaccccttctttgaaaaggtccaattcttacaatgcagacagcggt 414
Query: 1120 tcgcggttgcagatgatcgagcatgaaggggaagttgtgcgggcaaagtgcataccgcgc 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tcgcggttgcagatgatcgagcatgaaggggaagttgtgcgggcaaagtgcataccgcgc 354
Query: 1180 aagtctaagacgctaacaacaaagaaagaagagggtacttccatggatattgttagcaga 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aagtctaagacgctaacaacaaagaaagaagagggtacttccatggatattgttagcaga 294
Query: 1240 agccaacatgggagtaaaagatttgatggttaacta 1275
||||||||||||||||||||||||||||||||||||
Sbjct: 293 agccaacatgggagtaaaagatttgatggttaacta 258
>gnl|LJGI|TC77064 weakly similar to UniRef100_Q9KB98 Cluster: BH2030 protein; n=1;
Bacillus halodurans|Rep: BH2030 protein - Bacillus
halodurans, partial (4%)
Length = 738
Score = 323 bits (163), Expect = 2e-87
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 1113 cagcggttcgcggttgcagatgatcgagcatgaaggggaagttgtgcgggcaaagtgcat 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cagcggttcgcggttgcagatgatcgagcatgaaggggaagttgtgcgggcaaagtgcat 305
Query: 1173 accgcgcaagtctaagacgctaacaacaaagaaagaagagggtacttccatggatattgt 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 accgcgcaagtctaagacgctaacaacaaagaaagaagagggtacttccatggatattgt 365
Query: 1233 tagcagaagccaacatgggagtaaaagatttgatggttaacta 1275
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tagcagaagccaacatgggagtaaaagatttgatggttaacta 408