Miyakogusa Predicted Gene
- Lj3g3v3155130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3155130.1 Non Chatacterized Hit- tr|K3ZD38|K3ZD38_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si024470,37.24,4e-19,HTH_MYB,Myb domain;
Homeodomain-like,Homeodomain-like; SANT SWI3, ADA2, N-CoR and
TFIIIB'' DNA-bin,,CUFF.45368.1
(627 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322741 similar to UniRef100_Q0PJI3 Cluster: MYB trans... 581 e-165
gnl|LJGI|TC82252 similar to UniRef100_Q0PJB4 Cluster: MYB transc... 432 e-120
gnl|LJGI|DC599812 similar to UniRef100_Q0PJB4 Cluster: MYB trans... 111 5e-24
gnl|LJGI|TC69812 homologue to UniRef100_Q0PJI3 Cluster: MYB tran... 105 3e-22
gnl|LJGI|TC63582 homologue to UniRef100_Q0PJI3 Cluster: MYB tran... 105 3e-22
>gnl|LJGI|FS322741 similar to UniRef100_Q0PJI3 Cluster: MYB transcription factor
MYB139; n=1; Glycine max|Rep: MYB transcription factor
MYB139 - Glycine max (Soybean), partial (9%)
Length = 293
Score = 581 bits (293), Expect = e-165
Identities = 293/293 (100%)
Strand = Plus / Minus
Query: 203 cttcaagctgtgaatcctcactgacctcaaataatcatggtgtggattcacatgcttcca 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cttcaagctgtgaatcctcactgacctcaaataatcatggtgtggattcacatgcttcca 234
Query: 263 aagaggctggagaagaagacagcttttatgacacaggtggagctcataacatgaataatg 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aagaggctggagaagaagacagcttttatgacacaggtggagctcataacatgaataatg 174
Query: 323 ttcatgtaattggagaagatcaccaagatggtggtgatgatcaggggtactctatggatg 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttcatgtaattggagaagatcaccaagatggtggtgatgatcaggggtactctatggatg 114
Query: 383 atatatggaaagatattgctatgtcagaagatgagaattttaatctgcaaccagtcttcg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atatatggaaagatattgctatgtcagaagatgagaattttaatctgcaaccagtcttcg 54
Query: 443 atgggtatagtgaagaaggttgcaatttctcttatcctccattgttttctcca 495
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atgggtatagtgaagaaggttgcaatttctcttatcctccattgttttctcca 1
>gnl|LJGI|TC82252 similar to UniRef100_Q0PJB4 Cluster: MYB transcription factor
MYB145; n=1; Glycine max|Rep: MYB transcription factor
MYB145 - Glycine max (Soybean), partial (47%)
Length = 852
Score = 432 bits (218), Expect = e-120
Identities = 218/218 (100%)
Strand = Plus / Plus
Query: 1 atgacaccccaagaagagcgtctagtcacggagcttcactccaaatggggaaatagatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 atgacaccccaagaagagcgtctagtcacggagcttcactccaaatggggaaatagatgg 694
Query: 61 tctagaattgctcgcaaattaccggggcgcactgataatgagatcaagaactattggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tctagaattgctcgcaaattaccggggcgcactgataatgagatcaagaactattggagg 754
Query: 121 actcacatgaggaaaaagaaggctcaggagaaggagaagaagcgtgcagcagaagctgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 actcacatgaggaaaaagaaggctcaggagaaggagaagaagcgtgcagcagaagctgca 814
Query: 181 tcatcatcatcacctgctgattcttcaagctgtgaatc 218
||||||||||||||||||||||||||||||||||||||
Sbjct: 815 tcatcatcatcacctgctgattcttcaagctgtgaatc 852
>gnl|LJGI|DC599812 similar to UniRef100_Q0PJB4 Cluster: MYB transcription factor
MYB145; n=1; Glycine max|Rep: MYB transcription factor
MYB145 - Glycine max (Soybean), partial (37%)
Length = 555
Score = 111 bits (56), Expect = 5e-24
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 1 atgacaccccaagaagagcgtctagtcacggagcttcactccaaatggggaaatag 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atgacaccccaagaagagcgtctagtcacggagcttcactccaaatggggaaatag 396
>gnl|LJGI|TC69812 homologue to UniRef100_Q0PJI3 Cluster: MYB transcription factor
MYB139; n=1; Glycine max|Rep: MYB transcription factor
MYB139 - Glycine max (Soybean), partial (64%)
Length = 1148
Score = 105 bits (53), Expect = 3e-22
Identities = 103/119 (86%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 34 cttcactccaaatggggaaatagatggtctagaattgctcgcaaattaccggggcgcact 93
||||| |||||||||||||| |||||||| ||||||||| |||||||||| ||||||||
Sbjct: 338 cttcagtccaaatggggaaacagatggtcaagaattgctagcaaattacctgggcgcaca 397
Query: 94 gataatgagatcaagaactattggaggactcacatgaggaaaaagaaggctcaggagaa 152
|| |||||||| ||||| | ||||| || ||||||||| |||||||||||||||||
Sbjct: 398 gacaatgagattaagaatttctggagaacccacatgagg---aagaaggctcaggagaa 453
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 372 ctctatggatgatatatggaaagatattgctatgtcagaaga 413
||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 664 ctctatggatgatatatggaaagatattgatctttcagaaga 705
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 248 attcacatgcttccaaagaggctggagaagaa 279
||||||||||||||||| ||||||||||||||
Sbjct: 528 attcacatgcttccaaaaaggctggagaagaa 559
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 494 catcatgggattattcttcagaccccctttgggtgatggatga 536
|||||||||| ||||||||||| || |||||||||||| ||||
Sbjct: 756 catcatgggagtattcttcagatcctctttgggtgatgaatga 798
>gnl|LJGI|TC63582 homologue to UniRef100_Q0PJI3 Cluster: MYB transcription factor
MYB139; n=1; Glycine max|Rep: MYB transcription factor
MYB139 - Glycine max (Soybean), partial (56%)
Length = 762
Score = 105 bits (53), Expect = 3e-22
Identities = 103/119 (86%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 34 cttcactccaaatggggaaatagatggtctagaattgctcgcaaattaccggggcgcact 93
||||| |||||||||||||| |||||||| ||||||||| |||||||||| ||||||||
Sbjct: 406 cttcagtccaaatggggaaacagatggtcaagaattgctagcaaattacctgggcgcaca 465
Query: 94 gataatgagatcaagaactattggaggactcacatgaggaaaaagaaggctcaggagaa 152
|| |||||||| ||||| | ||||| || ||||||||| |||||||||||||||||
Sbjct: 466 gacaatgagattaagaatttctggagaacccacatgagg---aagaaggctcaggagaa 521
Score = 58.0 bits (29), Expect = 7e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 372 ctctatggatgatatatggaaagatattg 400
|||||||||||||||||||||||||||||
Sbjct: 726 ctctatggatgatatatggaaagatattg 754