Miyakogusa Predicted Gene

Lj3g3v3153000.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3153000.1 Non Chatacterized Hit- tr|F6HRR5|F6HRR5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.5,1e-18,OS07G0107100 PROTEIN,NULL; NUCLEOPORIN-RELATED,NULL;
Dirigent,Plant disease resistance response prot,CUFF.45353.1
         (355 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66585 similar to UniRef100_A7Q440 Cluster: Chromosome...   505   e-143
gnl|LJGI|BF177810 similar to UniRef100_A7NZ77 Cluster: Chromosom...   111   3e-24

>gnl|LJGI|TC66585 similar to UniRef100_A7Q440 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (58%)
          Length = 1116

 Score =  505 bits (255), Expect = e-143
 Identities = 330/355 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtttgggacgatgtccgtgtttgacgatgaattaacagaaggacatgagttgggatca 60
           ||||||||||| ||| | |||||||| |||||||| |||||||| ||||| |||||||||
Sbjct: 623 atgtttgggacaatgacagtgtttgatgatgaattgacagaagggcatgaattgggatca 682

                                                                       
Query: 61  ggattggtgggaaaagcacaggggttttacattgcaagctcagtggacggaaggagccag 120
           ||| ||||||| ||||||||||| |||||||| |||||||||||||||||||  ||||||
Sbjct: 683 ggaatggtggggaaagcacagggattttacatagcaagctcagtggacggaacaagccag 742

                                                                       
Query: 121 gtgatggctttcactgcaaagtttgaggagaatggttatgtggatagtctcagcttcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gtgatggctttcactgcaaagtttgaggagaatggttatgtggatagtctcagcttcttt 802

                                                                       
Query: 181 ggtgtccacagaacacaagtctcagaatcacaacttgccatcattggtggaactggaaag 240
           ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 803 ggtgtccacggaacacaagtctcagaatcacaacttgcaatcattggtggcactggaaag 862

                                                                       
Query: 241 tatgtgaatgctgagggatttgctataattaagacctttcctgttaccaatgatcaccaa 300
           ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 863 tatgtgaatgctgagggctttgctattattaagacgtttcctgttaccaatgatcagcaa 922

                                                                  
Query: 301 cataacactgatggcctcgaaactctcttgcaactcactgcttatcttgcctagc 355
           ||| |||||||||| ||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 923 catcacactgatggactcgagactctcttgcaactcactgcctatcttgcatagc 977


>gnl|LJGI|BF177810 similar to UniRef100_A7NZ77 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 417

 Score =  111 bits (56), Expect = 3e-24
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                   
Query: 1   atgtttgggacgatgtccgtgtttgacgatgaattaacagaaggacatgagttggg 56
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgtttgggacgatgtccgtgtttgacgatgaattaacagaaggacatgagttggg 417