Miyakogusa Predicted Gene
- Lj3g3v3142940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3142940.1 CUFF.45350.1
(330 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS319290 similar to UniRef100_Q29A33 Cluster: Ataxin-2 ... 498 e-140
gnl|LJGI|DC594718 similar to UniRef100_A7PGV7 Cluster: Chromosom... 64 6e-10
gnl|LJGI|TC58343 similar to UniRef100_Q9SEU4 Cluster: Serine/arg... 58 4e-08
gnl|LJGI|DC596315 similar to UniRef100_A7PGV7 Cluster: Chromosom... 56 1e-07
gnl|LJGI|TC74148 similar to UniRef100_A7PGV7 Cluster: Chromosome... 56 1e-07
>gnl|LJGI|FS319290 similar to UniRef100_Q29A33 Cluster: Ataxin-2 homolog; n=1;
Drosophila pseudoobscura|Rep: Ataxin-2 homolog -
Drosophila, partial (1%)
Length = 601
Score = 498 bits (251), Expect = e-140
Identities = 254/255 (99%)
Strand = Plus / Minus
Query: 1 atgcaagaaagattgaatcagaagaatacctgcttcacaaggtttaacctatgtgttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atgcaagaaagattgaatcagaagaatacctgcttcacaaggtttaacctatgtgttcaa 197
Query: 61 ttggtagaaaatggatctagaattgcgatcaaagggagcaaatccaacgagtggcagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ttggtagaaaatggatctagaattgcgatcaaagggagcaaatccaacgagtggcagaac 137
Query: 121 agatccggcgaggcgtggtgtgtggctgcgatggagatggagcggtggtcgctcgacggc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 136 agatccggcgaggcgtggtgtgtggctgcgatggagatggagtggtggtcgctcgacggc 77
Query: 181 ggcgaaggttgcttcacaatgctcgagcttgacgaacgattggcgaggacgacgatggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ggcgaaggttgcttcacaatgctcgagcttgacgaacgattggcgaggacgacgatggct 17
Query: 241 gttgcgttgcgacac 255
|||||||||||||||
Sbjct: 16 gttgcgttgcgacac 2
>gnl|LJGI|DC594718 similar to UniRef100_A7PGV7 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 469
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 135 gtggtgtgtggctgcgatggagatggagcggtggtcgctc 174
|||| ||||||||||||||||||||||||| |||||||||
Sbjct: 377 gtggagtgtggctgcgatggagatggagcgatggtcgctc 338
>gnl|LJGI|TC58343 similar to UniRef100_Q9SEU4 Cluster: Serine/arginine-rich
protein; n=1; Arabidopsis thaliana|Rep:
Serine/arginine-rich protein - Arabidopsis thaliana
(Mouse-ear cress), partial (23%)
Length = 813
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 1 atgcaagaaagattgaatcagaagaatacctgcttcacaaggttt 45
||||||| ||||||||||| || ||||||||||||| ||||||||
Sbjct: 84 atgcaaggaagattgaatcggatgaatacctgcttcgcaaggttt 40
>gnl|LJGI|DC596315 similar to UniRef100_A7PGV7 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 575
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 135 gtggtgtgtggctgcgatggagatggagcggtggtcgctc 174
|||| ||||||||||||||||||||||||| |||| ||||
Sbjct: 312 gtggagtgtggctgcgatggagatggagcgatggttgctc 273
>gnl|LJGI|TC74148 similar to UniRef100_A7PGV7 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 469
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 135 gtggtgtgtggctgcgatggagatggagcggtggtcgctc 174
|||| ||||||||||||||||||||||||| |||| ||||
Sbjct: 377 gtggagtgtggctgcgatggagatggagcgatggttgctc 338