Miyakogusa Predicted Gene
- Lj3g3v3132900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3132900.1 Non Chatacterized Hit- tr|I1LK90|I1LK90_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.69,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; CCR4 NOT-RELATED,NULL;
NOT2_3_5,NOT2/NOT3/NOT5,CUFF.45345.1
(1845 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74498 similar to UniRef100_A7NZ87 Cluster: Chromosome... 878 0.0
gnl|LJGI|DC592944 similar to UniRef100_A7NZ87 Cluster: Chromosom... 628 e-179
gnl|LJGI|GO008348 similar to UniRef100_A7NZ87 Cluster: Chromosom... 452 e-126
gnl|LJGI|TC70707 similar to UniRef100_A7NZ87 Cluster: Chromosome... 107 2e-22
gnl|LJGI|BP076652 similar to UniRef100_Q52JK6 Cluster: VIP2; n=1... 80 6e-14
>gnl|LJGI|TC74498 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (24%)
Length = 729
Score = 878 bits (443), Expect = 0.0
Identities = 449/451 (99%)
Strand = Plus / Plus
Query: 1395 tgatcttactacacttgggttaaatttgaattcatcagagaatcttcacaagacttttgc 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatcttactacacttgggttaaatttgaattcatcagagaatcttcacaagacttttgc 60
Query: 1455 atctccatggtctgaagacccaactaaggctgacccagagtttagtgtgccacaatgtta 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctccatggtctgaagacccaactaaggctgacccagagtttagtgtgccacaatgtta 120
Query: 1515 ttacactaaacaaccacctactcttcatcaaggttatttttcaaagttttcggtggaaac 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttacactaaacaaccacctactcttcatcaaggttatttttcaaagttttcggtggaaac 180
Query: 1575 attgttttacatcttttacagcatgcccaaagatgaagcacagttatatgctgcaaatga 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgttttacatcttttacagcatgcccaaagatgaagcacagttatatgctgcaaatga 240
Query: 1635 gcttaacaacagaggatggttttatcacaaagagcttcgtctttggttgataagagttcc 1694
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 241 gcttaacaacagaggatggttttatcaccaagagcttcgtctttggttgataagagttcc 300
Query: 1695 caacatagagccactggttaaaacaaacacacatgagagaggatcatatcactgttttga 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caacatagagccactggttaaaacaaacacacatgagagaggatcatatcactgttttga 360
Query: 1755 accaaacacattcgaaatcatccgcaaggataattttgtcctacagtatgagttgttgga 1814
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acccaacacattcgaaatcatccgcaaggataattttgtcctacagtatgagttgttgga 420
Query: 1815 aaagagacctcatctgcctcaacattgagga 1845
|||||||||||||||||||||||||||||||
Sbjct: 421 aaagagacctcatctgcctcaacattgagga 451
>gnl|LJGI|DC592944 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 589
Score = 628 bits (317), Expect = e-179
Identities = 317/317 (100%)
Strand = Plus / Plus
Query: 1 atgtcggggttactaaattcttctctgaatggatctgcttcaaatcttccagatggcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgtcggggttactaaattcttctctgaatggatctgcttcaaatcttccagatggcgct 319
Query: 61 gggcggtcttttgctacatcattctctggatctattcaggggttgcacaacattcatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gggcggtcttttgctacatcattctctggatctattcaggggttgcacaacattcatggg 379
Query: 121 agctttaatgttcccaatatgtctggtacactcacatcaagaaactcaacaataaataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agctttaatgttcccaatatgtctggtacactcacatcaagaaactcaacaataaataat 439
Query: 181 gttccgtctgggggtgttcaacaaccaacagggagcctttctagtggaagatttacatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gttccgtctgggggtgttcaacaaccaacagggagcctttctagtggaagatttacatca 499
Query: 241 aacaatctccctgttgcactttcacagttatctcatggaagctcccatggacattctgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacaatctccctgttgcactttcacagttatctcatggaagctcccatggacattctgga 559
Query: 301 gtcaccaatagaggagg 317
|||||||||||||||||
Sbjct: 560 gtcaccaatagaggagg 576
>gnl|LJGI|GO008348 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 704
Score = 452 bits (228), Expect = e-126
Identities = 231/232 (99%)
Strand = Plus / Plus
Query: 86 ctggatctattcaggggttgcacaacattcatgggagctttaatgttcccaatatgtctg 145
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 345 ctggatctattcaggggttgcacaacattcataggagctttaatgttcccaatatgtctg 404
Query: 146 gtacactcacatcaagaaactcaacaataaataatgttccgtctgggggtgttcaacaac 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gtacactcacatcaagaaactcaacaataaataatgttccgtctgggggtgttcaacaac 464
Query: 206 caacagggagcctttctagtggaagatttacatcaaacaatctccctgttgcactttcac 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 caacagggagcctttctagtggaagatttacatcaaacaatctccctgttgcactttcac 524
Query: 266 agttatctcatggaagctcccatggacattctggagtcaccaatagaggagg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agttatctcatggaagctcccatggacattctggagtcaccaatagaggagg 576
Score = 176 bits (89), Expect = 3e-43
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 atgtcggggttactaaattcttctctgaatggatctgcttcaaatcttccagatggcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atgtcggggttactaaattcttctctgaatggatctgcttcaaatcttccagatggcgct 280
Query: 61 gggcggtcttttgctacatcattctctgg 89
|||||||||||||||||||||||||||||
Sbjct: 281 gggcggtcttttgctacatcattctctgg 309
>gnl|LJGI|TC70707 similar to UniRef100_A7NZ87 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 559
Score = 107 bits (54), Expect = 2e-22
Identities = 155/189 (82%), Gaps = 6/189 (3%)
Strand = Plus / Plus
Query: 92 ctattcaggggttgcacaacattcatgggagctttaatgttcccaatatgtctggtacac 151
||||||||||||||||||| ||||| |||||||||||||||||||| ||| | |||||
Sbjct: 377 ctattcaggggttgcacaatattcacgggagctttaatgttcccaacatgccgaatacac 436
Query: 152 tcacatcaagaaactcaacaataaataatgttccgtctgggggtgttcaacaaccaacag 211
| ||||||||||||| ||||||||| ||| |||| || ||||||||||| ||||
Sbjct: 437 ttacatcaagaaacttaacaataaa------tcctactggaggggttcaacaacctacag 490
Query: 212 ggagcctttctagtggaagatttacatcaaacaatctccctgttgcactttcacagttat 271
|| |||||||| ||||||||| | ||||| ||||| || ||||| | |||||| | |
Sbjct: 491 cgaatctttctagcggaagatttgcgtcaaataatctaccagttgctttgtcacagcttt 550
Query: 272 ctcatggaa 280
|||||||||
Sbjct: 551 ctcatggaa 559
Score = 97.6 bits (49), Expect = 2e-19
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 1 atgtcggggttactaaattcttctctgaatggatctgcttcaaatcttccagatggcgct 60
|||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 234 atgtcgggcttacttaattcttctctgaacggatctgcgtcaaatcttccagatggtacg 293
Query: 61 gggcggtcttttgctacatcattctctgg 89
|||||||||||||| || || ||||||||
Sbjct: 294 gggcggtcttttgcgacgtctttctctgg 322
>gnl|LJGI|BP076652 similar to UniRef100_Q52JK6 Cluster: VIP2; n=1; Nicotiana
benthamiana|Rep: VIP2 - Nicotiana benthamiana, partial
(13%)
Length = 342
Score = 79.8 bits (40), Expect = 6e-14
Identities = 101/120 (84%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 1591 tacagcatgcccaaagatgaagcacagttatatgctgcaaatgagcttaacaaca-gagg 1649
||||||||||| | |||||||||||| ||||||| ||| |||| ||| |||| | | ||
Sbjct: 342 tacagcatgcctagagatgaagcacaactatatgcagcacatgaactttacaaaacgggg 283
Query: 1650 atggttttatcacaaagagcttcgtctttggttgataagagttcccaacatagagccact 1709
|||||||||||| |||| | |||| | ||||| ||||||||||||||||| ||||||||
Sbjct: 282 ctggttttatcaccaagaacatcgtttgtggtttataagagttcccaacatggagccact 223