Miyakogusa Predicted Gene

Lj3g3v3087290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3087290.1 tr|B9H6B7|B9H6B7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_760413 PE=4
SV=1,30.5,5e-17,seg,NULL; coiled-coil,NULL,CUFF.45298.1
         (3345 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS321365 similar to UniRef100_A7NZC9 Cluster: Chromosom...   595   e-169

>gnl|LJGI|FS321365 similar to UniRef100_A7NZC9 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 728

 Score =  595 bits (300), Expect = e-169
 Identities = 300/300 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatcagtggcactgccactcctaatatggaggttatccaggaagaagagcccgttgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atgatcagtggcactgccactcctaatatggaggttatccaggaagaagagcccgttgcc 483

                                                                       
Query: 61  acttcgttagccttgcaacaaattgaagaaaatctgttcaagcattcgtcggacggtgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 acttcgttagccttgcaacaaattgaagaaaatctgttcaagcattcgtcggacggtgtt 543

                                                                       
Query: 121 attaccattggacatagaaagaatggtgctggtgttggtttatctccgaagcctgctgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 attaccattggacatagaaagaatggtgctggtgttggtttatctccgaagcctgctgca 603

                                                                       
Query: 181 ttaaccaaacaaactctaaccccgacttccatggcaaagcggaaggtacttgcaaacaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttaaccaaacaaactctaaccccgacttccatggcaaagcggaaggtacttgcaaacaat 663

                                                                       
Query: 241 gatgtggttggaagtgcatctaagcgcagtgcctgtccacggctggtaccttcatcctca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gatgtggttggaagtgcatctaagcgcagtgcctgtccacggctggtaccttcatcctca 723