Miyakogusa Predicted Gene
- Lj3g3v3086140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3086140.1 Non Chatacterized Hit- tr|I3S9E0|I3S9E0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,96.92,0,FAS1
domain,FAS1 domain; seg,NULL; Fasciclin,FAS1 domain; FAS1,FAS1 domain;
Four repeated domains in,CUFF.45323.1
(882 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70367 weakly similar to UniRef100_Q6J1A3 Cluster: Fas... 1748 0.0
gnl|LJGI|TC57803 weakly similar to UniRef100_Q8LEE9 Cluster: Fas... 1037 0.0
gnl|LJGI|GO023700 weakly similar to UniRef100_Q6J1A0 Cluster: Fa... 161 9e-39
gnl|LJGI|TC57308 weakly similar to UniRef100_Q8LEE9 Cluster: Fas... 72 6e-12
gnl|LJGI|TC58714 weakly similar to UniRef100_Q6J196 Cluster: Fas... 66 4e-10
gnl|LJGI|TC59738 weakly similar to UniRef100_Q8LEE9 Cluster: Fas... 62 6e-09
>gnl|LJGI|TC70367 weakly similar to UniRef100_Q6J1A3 Cluster: Fasciclin-like AGP 1;
n=1; Populus tremula x Populus alba|Rep: Fasciclin-like
AGP 1 - Populus tremula x Populus alba, partial (32%)
Length = 1141
Score = 1748 bits (882), Expect = 0.0
Identities = 882/882 (100%)
Strand = Plus / Plus
Query: 1 atgatgatgagtaagcaatctctattgtctttgtcacttgcactactagtttctctcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atgatgatgagtaagcaatctctattgtctttgtcacttgcactactagtttctctcttg 150
Query: 61 tattccaccactactttagcccaattatcacctgcttctgctccattacaacctgcacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 tattccaccactactttagcccaattatcacctgcttctgctccattacaacctgcacca 210
Query: 121 ccagtcccaaccacaccagcctctgccccaaaaccactggttccttcactgccagagtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ccagtcccaaccacaccagcctctgccccaaaaccactggttccttcactgccagagtca 270
Query: 181 ccaagtgattccacggcccctgacactgcagcggttgacatcgtcggaatcctgagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccaagtgattccacggcccctgacactgcagcggttgacatcgtcggaatcctgagaaag 330
Query: 241 gccaagtcattcaatgtcctaatccgcctcatgaaaaccactcaattgatcaaccaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gccaagtcattcaatgtcctaatccgcctcatgaaaaccactcaattgatcaaccaactc 390
Query: 301 aactcacagctcctaaccataaaaacaggtggcttaaccattcttgcaccagatgacagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aactcacagctcctaaccataaaaacaggtggcttaaccattcttgcaccagatgacagt 450
Query: 361 gccttctcagagctcaaagcagggttcctcaactctctttctgatggacagaagctcgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gccttctcagagctcaaagcagggttcctcaactctctttctgatggacagaagctcgaa 510
Query: 421 cttctacagttccatgtgatttcagactatgtttctagctcaaactttgataccttaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cttctacagttccatgtgatttcagactatgtttctagctcaaactttgataccttaaca 570
Query: 481 aaccctgtgagaacacttgcaggagcaagacctggtaaagtggaactgaatgtgattagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaccctgtgagaacacttgcaggagcaagacctggtaaagtggaactgaatgtgattagt 630
Query: 541 tatggtagcagtgtgaacatctcaacaggggaagtcaacaccaccatcactgggattata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tatggtagcagtgtgaacatctcaacaggggaagtcaacaccaccatcactgggattata 690
Query: 601 tacacggataagcatcttgctatttataaggtgggtaaggtgcttcttcctatggatttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tacacggataagcatcttgctatttataaggtgggtaaggtgcttcttcctatggatttc 750
Query: 661 tttgcagttgctaaagcaccagcaaaggctccatcttcggcaccagaaccttcagcagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tttgcagttgctaaagcaccagcaaaggctccatcttcggcaccagaaccttcagcagaa 810
Query: 721 gcccctaaagctgataaggagaagccatcatcagatgattcctctgattcatctcagatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 gcccctaaagctgataaggagaagccatcatcagatgattcctctgattcatctcagatt 870
Query: 781 agttccacaagcatgaaatctagcagtgtgaaaatcactacgtgtggaaaatgggtgtcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 agttccacaagcatgaaatctagcagtgtgaaaatcactacgtgtggaaaatgggtgtcc 930
Query: 841 ctagttcttggagtagctctcatgaccgtagtgtcaacataa 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 ctagttcttggagtagctctcatgaccgtagtgtcaacataa 972
>gnl|LJGI|TC57803 weakly similar to UniRef100_Q8LEE9 Cluster: Fasciclin-like
arabinogalactan protein 12 precursor; n=1; Arabidopsis
thaliana|Rep: Fasciclin-like arabinogalactan protein 12
precursor - Arabidopsis thaliana (Mouse-ear cress),
partial (23%)
Length = 1151
Score = 1037 bits (523), Expect = 0.0
Identities = 640/679 (94%)
Strand = Plus / Plus
Query: 38 ttgcactactagtttctctcttgtattccaccactactttagcccaattatcacctgctt 97
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 110 ttgcactactagtttctctcttgtattccaccactacactagcccaattatcacctgctt 169
Query: 98 ctgctccattacaacctgcaccaccagtcccaaccacaccagcctctgccccaaaaccac 157
||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 170 ctgctccattaaaacctgccacaccagtcccaaccacaccagcctcttccccaaaaccac 229
Query: 158 tggttccttcactgccagagtcaccaagtgattccacggcccctgacactgcagcggttg 217
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 230 tggttccttcattgccagagtcaccaagtgattccaccgcccctgacactgcagcggttg 289
Query: 218 acatcgtcggaatcctgagaaaggccaagtcattcaatgtcctaatccgcctcatgaaaa 277
|||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 acattgttggaatcctgcgaaaggccaagtcattcaatgtcctaatccgcctcatgaaaa 349
Query: 278 ccactcaattgatcaaccaactcaactcacagctcctaaccataaaaacaggtggcttaa 337
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 350 ccactcaattgatcaaccaactcaattcacagctcctaaccttaaaaacaggtggcttaa 409
Query: 338 ccattcttgcaccagatgacagtgccttctcagagctcaaagcagggttcctcaactctc 397
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 410 ccattcttgcaccagatgacagtgccttctcagggctcaaagcagggttcctcaactctc 469
Query: 398 tttctgatggacagaagctcgaacttctacagttccatgtgatttcagactatgtttcta 457
||||||||||||| |||||||||||| |||||||||| || |||||||||||||||||||
Sbjct: 470 tttctgatggacaaaagctcgaacttttacagttccacgtaatttcagactatgtttcta 529
Query: 458 gctcaaactttgataccttaacaaaccctgtgagaacacttgcaggagcaagacctggta 517
||||||||||||| || |||||||||| || ||||||||||| ||||| || |||||||
Sbjct: 530 gctcaaactttgacactctaacaaaccccgtaagaacacttgctggagctaggcctggta 589
Query: 518 aagtggaactgaatgtgattagttatggtagcagtgtgaacatctcaacaggggaagtca 577
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 590 aagtggaactgaacgtgattagttatggtagcagtgtgaacatctcaacaggggaggtta 649
Query: 578 acaccaccatcactgggattatatacacggataagcatcttgctatttataaggtgggta 637
||||||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||
Sbjct: 650 acaccaccatcacagggattatatacactgataagcatcttgctatctacaaggtgggta 709
Query: 638 aggtgcttcttcctatggatttctttgcagttgctaaagcaccagcaaaggctccatctt 697
||||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||
Sbjct: 710 aggtgcttcttcctacagatttctttgcagttgctaaggcaccagcaaaggcaccgtctt 769
Query: 698 cggcaccagaaccttcagc 716
||||||||||||||||||
Sbjct: 770 tggcaccagaaccttcagc 788
>gnl|LJGI|GO023700 weakly similar to UniRef100_Q6J1A0 Cluster: Fasciclin-like AGP 4;
n=1; Populus tremula x Populus alba|Rep: Fasciclin-like
AGP 4 - Populus tremula x Populus alba, partial (33%)
Length = 555
Score = 161 bits (81), Expect = 9e-39
Identities = 318/393 (80%), Gaps = 3/393 (0%)
Strand = Plus / Plus
Query: 262 atccgcctcatgaaaaccactcaattgatcaaccaactcaactcacagctcctaaccata 321
||||||||||||||| |||| || |||| ||||||||||||||| |||||| |||||||
Sbjct: 99 atccgcctcatgaaagccacccagttgaacaaccaactcaactcccagctcttaaccatc 158
Query: 322 aaaacaggtggcttaaccattcttgcaccagatgacagtgccttctcagagctcaaagca 381
|| |||| ||||||||||| || || || || ||||| |||||||| || |||||| |
Sbjct: 159 aagtcaggcggcttaaccatcctcgccccggaagacagcgccttctccgaactcaaaccg 218
Query: 382 gggttcctcaactctctttctgatggacagaagctcgaacttctacagttccatgtgatt 441
|| ||||||||| | || || |||| |||||||| || || || ||||||||||| ||
Sbjct: 219 ggcttcctcaacaccctctccaatggccagaagcttgagctccttcagttccatgttctt 278
Query: 442 tcagactatgtttctagctcaaactttgataccttaacaaaccctgtgagaacacttgca 501
||||| ||| || |||||||| ||||| ||| | || ||||||||||||||| | |||
Sbjct: 279 ccagacattgtctccagctcaaattttgacaccctcaccaaccctgtgagaacattggca 338
Query: 502 ggagcaagacctggtaaagtggaactgaatgtgattagttatggtagcagtgtgaaca-t 560
||| | ||| || || ||||| ||||| |||||||| |||||| |||||||||||| |
Sbjct: 339 ggaaacaaacccgggaaggtggagctgaacgtgattagctatggtggcagtgtgaacatt 398
Query: 561 ctcaacaggggaagtcaacaccaccatcactggga-ttatatacacggataagcatc-tt 618
|| || || | || |||||||| |||| || | ||||||| || |||||||||| ||
Sbjct: 399 ttccacgggacaggttaacaccacaatcaatgacatttatatatactgataagcatcttt 458
Query: 619 gctatttataaggtgggtaaggtgcttcttcct 651
||||||||||| || |||||||| |||||||||
Sbjct: 459 gctatttataatgttggtaaggtacttcttcct 491
>gnl|LJGI|TC57308 weakly similar to UniRef100_Q8LEE9 Cluster: Fasciclin-like
arabinogalactan protein 12 precursor; n=1; Arabidopsis
thaliana|Rep: Fasciclin-like arabinogalactan protein 12
precursor - Arabidopsis thaliana (Mouse-ear cress),
partial (24%)
Length = 1172
Score = 71.9 bits (36), Expect = 6e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 335 taaccattcttgcaccagatgacagtgccttctcagagctcaaagcagggttcctcaact 394
|||||||||||||||| ||||| |||| |||||| ||||||||||||||||| |||| |
Sbjct: 423 taaccattcttgcacctgatgatggtgcattctcacagctcaaagcagggttcttcaatt 482
Query: 395 ctct 398
||||
Sbjct: 483 ctct 486
>gnl|LJGI|TC58714 weakly similar to UniRef100_Q6J196 Cluster: Fasciclin-like AGP 8;
n=1; Populus tremula x Populus alba|Rep: Fasciclin-like
AGP 8 - Populus tremula x Populus alba, partial (22%)
Length = 1179
Score = 65.9 bits (33), Expect = 4e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 335 taaccattcttgcaccagatgacagtgccttctcagagctcaaagcagggttcctcaact 394
||||||| || |||||||||||| ||| |||||| | ||||||||||||||||||||||
Sbjct: 427 taaccatcctcgcaccagatgactctgctttctcacacctcaaagcagggttcctcaact 486
Query: 395 c 395
|
Sbjct: 487 c 487
>gnl|LJGI|TC59738 weakly similar to UniRef100_Q8LEE9 Cluster: Fasciclin-like
arabinogalactan protein 12 precursor; n=1; Arabidopsis
thaliana|Rep: Fasciclin-like arabinogalactan protein 12
precursor - Arabidopsis thaliana (Mouse-ear cress),
partial (24%)
Length = 1146
Score = 61.9 bits (31), Expect = 6e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 328 ggtggcttaaccattcttgcaccagatgacagtgccttctcagagctcaaagcagggttc 387
||||| ||||||||| | ||||||||||| ||||||| ||| |||||||||| |||| |
Sbjct: 378 ggtggtttaaccattttagcaccagatgatggtgccttttcacagctcaaagctgggtac 437
Query: 388 ctcaactctct 398
||||||||||
Sbjct: 438 ttcaactctct 448