Miyakogusa Predicted Gene
- Lj3g3v3086090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3086090.1 Non Chatacterized Hit- tr|C4J389|C4J389_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,50.65,0.000000000004,no
description,Glycoside hydrolase, catalytic domain;
Glyco_hydro_35,Glycoside hydrolase, family 35;,gene.g50325.t1.1
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74672 similar to UniRef100_Q5CCP7 Cluster: Beta-galac... 281 4e-75
gnl|LJGI|DC598153 homologue to UniRef100_Q5CCP7 Cluster: Beta-ga... 186 2e-46
gnl|LJGI|TC68205 similar to UniRef100_Q5CCP8 Cluster: Beta-galac... 66 4e-10
gnl|LJGI|TC76157 similar to UniRef100_Q9M5J4 Cluster: Beta-galac... 56 4e-07
gnl|LJGI|TC65876 similar to UniRef100_Q5CCP8 Cluster: Beta-galac... 54 2e-06
>gnl|LJGI|TC74672 similar to UniRef100_Q5CCP7 Cluster: Beta-galactosidase; n=1; Pyrus
pyrifolia|Rep: Beta-galactosidase - Pyrus pyrifolia
(Japanese pear) (Pyrus serotina), partial (21%)
Length = 973
Score = 281 bits (142), Expect = 4e-75
Identities = 208/230 (90%)
Strand = Plus / Plus
Query: 32 tttggctcctctgtgtttattcccctacatgtttttgtgccaatgtgacgtatgatcata 91
||||| |||||||||||||| ||||| | ||||||||| |||||||||| ||||||||||
Sbjct: 467 tttggttcctctgtgtttatgcccctgcttgtttttgtaccaatgtgacttatgatcata 526
Query: 92 gagcattggtcattgatggcaagcgcagggtcttgatctctggttctatccattaccctc 151
||||||||||||||||||||||| | ||||||||| | ||||||||||| || |||||||
Sbjct: 527 gagcattggtcattgatggcaagagaagggtcttggtttctggttctattcactaccctc 586
Query: 152 gcagtacccctgagatgtggccagaccttattcagaaagcaaaagatggaggacttgacg 211
| ||||| || ||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 587 gtagtactcccgagatgtggccagaccttattcagaaatcaaaagatggaggacttgatg 646
Query: 212 tgattgaaacctatgttttctggaacttacatgaaccagttcaaggccag 261
| ||||| ||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 647 tcattgagacctatgttttctggaacttacacgaaccggttcgaggccag 696
Score = 85.7 bits (43), Expect = 4e-16
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 260 aggcagaaatgcagcgattcacagctaagattgttgatatgatgaagcaagagaatctct 319
||||||||||| | || ||||| || ||||| || || |||||||||||||||||||| |
Sbjct: 875 aggcagaaatgaaacggttcactgccaagatcgtggacatgatgaagcaagagaatctat 934
Query: 320 atgcatcacagggagggcctattattttatctcagattg 358
||||| | | ||||||||||||||| ||||||||||||
Sbjct: 935 atgcaagagaaggagggcctattattctatctcagattg 973
>gnl|LJGI|DC598153 homologue to UniRef100_Q5CCP7 Cluster: Beta-galactosidase; n=1;
Pyrus pyrifolia|Rep: Beta-galactosidase - Pyrus
pyrifolia (Japanese pear) (Pyrus serotina), partial (6%)
Length = 564
Score = 186 bits (94), Expect = 2e-46
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 64 ttttgtgccaatgtgacgtatgatcatagagcattggtcattgatggcaagcgcagggtc 123
|||||||| |||||| ||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 411 ttttgtgcaaatgtggagtatgatcacagagcattggtcattgatggaaaacgcagggtc 470
Query: 124 ttgatctctggttctatccattaccctcgcagtacccctgagatgtggccagaccttatt 183
||||||||||||||||| || ||||| || ||||| || |||||||||||||||||||||
Sbjct: 471 ttgatctctggttctattcactacccacgtagtactccagagatgtggccagaccttatt 530
Query: 184 cagaaagcaaaagatggaggacttgacgtgattg 217
|||||| | ||||||||||||||||| |||||||
Sbjct: 531 cagaaatccaaagatggaggacttgatgtgattg 564
>gnl|LJGI|TC68205 similar to UniRef100_Q5CCP8 Cluster: Beta-galactosidase; n=1; Pyrus
pyrifolia|Rep: Beta-galactosidase - Pyrus pyrifolia
(Japanese pear) (Pyrus serotina), partial (17%)
Length = 573
Score = 65.9 bits (33), Expect = 4e-10
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 128 tctctggttctatccattaccctcgcagtacccctgagatgtggccagaccttattcaga 187
|||||||||| || ||||| || | ||||||||||| |||||| ||| || |||||||
Sbjct: 266 tctctggttccatacattatcccagaagtacccctgatatgtgggaagatctgattcaga 325
Query: 188 aagcaaaagatggaggacttgacgtgattgaaacctatgttttctggaa 236
|||| ||||| || || ||||| || ||||| |||||||| ||||||||
Sbjct: 326 aagccaaagaagggggtcttgatgtaattgagacctatgtcttctggaa 374
>gnl|LJGI|TC76157 similar to UniRef100_Q9M5J4 Cluster: Beta-galactosidase; n=1; Vigna
radiata var. radiata|Rep: Beta-galactosidase - Phaseolus
aureus (Mung bean) (Vigna radiata), partial (77%)
Length = 1921
Score = 56.0 bits (28), Expect = 4e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 124 ttgatctctggttctatccattaccctcgcagtacccctgagatgtggccagaccttatt 183
|||||||||||||| ||||| ||||| | || |||||| |||||||||||||| | ||
Sbjct: 347 ttgatctctggttccatccactacccaagaagcacccctcagatgtggccagacttaatc 406
Query: 184 cagaaagcaaaagatggagg 203
|| || || |||||||||||
Sbjct: 407 caaaaggccaaagatggagg 426
>gnl|LJGI|TC65876 similar to UniRef100_Q5CCP8 Cluster: Beta-galactosidase; n=1; Pyrus
pyrifolia|Rep: Beta-galactosidase - Pyrus pyrifolia
(Japanese pear) (Pyrus serotina), partial (25%)
Length = 890
Score = 54.0 bits (27), Expect = 2e-06
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 154 agtacccctgagatgtggccagaccttattcagaaagcaaaagatggaggacttgacgtg 213
||||||||||| |||||| ||| || ||||| || || ||||||||||| | || |||
Sbjct: 328 agtacccctgatatgtgggaagatctgattcaaaaggctaaagatggaggtttggatgtg 387
Query: 214 attgaaacctatgttttctggaa 236
|||||||||||||| || |||||
Sbjct: 388 attgaaacctatgtcttttggaa 410