Miyakogusa Predicted Gene
- Lj3g3v3086010.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3086010.3 Non Chatacterized Hit- tr|I3S0K3|I3S0K3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.75,0,seg,NULL;
Root_cap,Root cap; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.45307.3
(1185 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58846 similar to UniRef100_A7NZH7 Cluster: Chromosome... 946 0.0
gnl|LJGI|TC82038 186 2e-46
>gnl|LJGI|TC58846 similar to UniRef100_A7NZH7 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 797
Score = 946 bits (477), Expect = 0.0
Identities = 477/477 (100%)
Strand = Plus / Plus
Query: 254 cctcagaatatgaggtgttgtcagctctgccaagtggacaagaaagagccttctgcaaag 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcagaatatgaggtgttgtcagctctgccaagtggacaagaaagagccttctgcaaag 380
Query: 314 caaagaacacatgtcagtttaagaccctctcttgtcctgctgagtgccagaagaggaagc 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagaacacatgtcagtttaagaccctctcttgtcctgctgagtgccagaagaggaagc 440
Query: 374 ccaagaacaacaagaaggccaagggctgtttcattgactgcagcagcaaatgtgaagcca 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaagaacaacaagaaggccaagggctgtttcattgactgcagcagcaaatgtgaagcca 500
Query: 434 cttgcaagtttaggaaatccaaatgtgatggctatggtgctttatgttatgatcctcgct 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgcaagtttaggaaatccaaatgtgatggctatggtgctttatgttatgatcctcgct 560
Query: 494 ttgttggtggtgatggtgtgatgttctacttccacggcgccaaaggaggaaactttgcca 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgttggtggtgatggtgtgatgttctacttccacggcgccaaaggaggaaactttgcca 620
Query: 554 ttgcttctgatgatgagttccagatcaatgctcacttcatcggtacccgaccagagggaa 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgcttctgatgatgagttccagatcaatgctcacttcatcggtacccgaccagagggaa 680
Query: 614 ggactcgtgactacacatgggtgcaggcactttctgtcatgtttgacacacacactcttg 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggactcgtgactacacatgggtgcaggcactttctgtcatgtttgacacacacactcttg 740
Query: 674 tcattgctgctaatagagtatctaaatgggatgacaatgttgactctctcatagtga 730
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcattgctgctaatagagtatctaaatgggatgacaatgttgactctctcatagtga 797
Score = 186 bits (94), Expect = 2e-46
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 atggctggaagaaagctcagcatcttgctagtggccatctttgtcttactcatggccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggctggaagaaagctcagcatcttgctagtggccatctttgtcttactcatggccatg 127
Query: 61 gaaggtgccattgctcaaggccaaggaaagggtg 94
||||||||||||||||||||||||||||||||||
Sbjct: 128 gaaggtgccattgctcaaggccaaggaaagggtg 161
>gnl|LJGI|TC82038
Length = 486
Score = 186 bits (94), Expect = 2e-46
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 atggctggaagaaagctcagcatcttgctagtggccatctttgtcttactcatggccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atggctggaagaaagctcagcatcttgctagtggccatctttgtcttactcatggccatg 217
Query: 61 gaaggtgccattgctcaaggccaaggaaagggtg 94
||||||||||||||||||||||||||||||||||
Sbjct: 218 gaaggtgccattgctcaaggccaaggaaagggtg 251
Score = 143 bits (72), Expect = 3e-33
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 254 cctcagaatatgaggtgttgtcagctctgccaagtggacaagaaagagccttctgcaaag 313
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 411 cctcagaatatgaggtgttgtcagctctgccaagtggacaagagagagccttctgcaaag 470
Query: 314 caaagaacacatgtca 329
||||||||||||||||
Sbjct: 471 caaagaacacatgtca 486