Miyakogusa Predicted Gene

Lj3g3v3085860.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3085860.3 Non Chatacterized Hit- tr|K3Y7Q4|K3Y7Q4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009962,62.86,7e-19,seg,NULL; PREDICTED PROTEIN (FRAGMENT),NULL;
MEMBRANE ASSOCIATED RING FINGER,NULL,CUFF.45283.3
         (420 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64680 similar to UniRef100_A7PT25 Cluster: Chromosome...   833   0.0  

>gnl|LJGI|TC64680 similar to UniRef100_A7PT25 Cluster: Chromosome chr8 scaffold_29,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_29, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (35%)
          Length = 1291

 Score =  833 bits (420), Expect = 0.0
 Identities = 420/420 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttgcctatttctgttttctggagcagctattggtttcaaaaatgggaactggcgcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgcttgcctatttctgttttctggagcagctattggtttcaaaaatgggaactggcgcg 324

                                                                       
Query: 61  attgccatatctcttccattttcttgtgtactgggtctgctctcctccatgacttcatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attgccatatctcttccattttcttgtgtactgggtctgctctcctccatgacttcatca 384

                                                                       
Query: 121 accatggtgaagagcaggttcatctggatctatgcatccgtccaatttgctctggtggtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 accatggtgaagagcaggttcatctggatctatgcatccgtccaatttgctctggtggtt 444

                                                                       
Query: 181 ctcttcgcgcatatattttactctgtggttcatgtgcaagcagttttgtcaatccttctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcttcgcgcatatattttactctgtggttcatgtgcaagcagttttgtcaatccttctt 504

                                                                       
Query: 241 gcaacatttgctggttttggtgtggtgatgtgtgggagttctatccttgtggaggttttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaacatttgctggttttggtgtggtgatgtgtgggagttctatccttgtggaggttttt 564

                                                                       
Query: 301 agatggaggaggagatggcaagctttatcagagcagcaacaactacatggccctcaaact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agatggaggaggagatggcaagctttatcagagcagcaacaactacatggccctcaaact 624

                                                                       
Query: 361 gcaaacacaccacgttcaggcagtgttactcaacctgtggtgcaaaatcaacagaactga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcaaacacaccacgttcaggcagtgttactcaacctgtggtgcaaaatcaacagaactga 684