Miyakogusa Predicted Gene
- Lj3g3v3085530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3085530.1 Non Chatacterized Hit- tr|I1LL54|I1LL54_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,93.36,0,no
description,Homeodomain-like; no description,START-like domain;
SUBFAMILY NOT NAMED,NULL; FAMILY ,CUFF.45251.1
(2532 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71311 similar to UniRef100_Q5D1M6 Cluster: Class III ... 428 e-119
gnl|LJGI|TC79185 similar to UniRef100_A7NZJ8 Cluster: Chromosome... 414 e-114
gnl|LJGI|AV781096 homologue to UniRef100_A7NZJ8 Cluster: Chromos... 408 e-113
gnl|LJGI|BP056674 similar to UniRef100_Q5D1M5 Cluster: Class III... 244 2e-63
gnl|LJGI|TC70081 homologue to UniRef100_A8E664 Cluster: Class II... 86 1e-15
>gnl|LJGI|TC71311 similar to UniRef100_Q5D1M6 Cluster: Class III HD-Zip protein 1; n=1;
Populus trichocarpa|Rep: Class III HD-Zip protein 1 -
Populus trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (16%)
Length = 637
Score = 428 bits (216), Expect = e-119
Identities = 362/410 (88%), Gaps = 3/410 (0%)
Strand = Plus / Plus
Query: 2123 gttactatttggggacagacttgctgagatcagattctcttgttggagatatgatgctga 2182
|||| ||||||||||| | |||||||||| ||||||||||| || ||| || | ||||
Sbjct: 1 gttattatttggggactggactgctgagatctgattctcttgtgggtgatttggtactga 60
Query: 2183 aacatctgtggcatcatcaggatgctgttctatgctgttcactgaagtcactgcctgtgt 2242
||||| ||||||||||||||||||| || | || ||||| |||||||| |||| |||
Sbjct: 61 aacatttgtggcatcatcaggatgccattttgtgttgttctttgaagtcagtgcccatgt 120
Query: 2243 tcatctttgcaaaccaagctggccttgacatgttggaaacaacgctagtggccttacaag 2302
|||| |||||||| || ||||| |||||||||||||||||||| || ||||| |||||||
Sbjct: 121 tcatatttgcaaatcaggctgggcttgacatgttggaaacaactcttgtggctttacaag 180
Query: 2303 acatcacattggataaaatatttgatgagtctggacgcaaggcattgtttgcagactttg 2362
||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 181 acatcactttggataaaatatttgatgagtctggccgcaaggcattgtttgcagatttcg 240
Query: 2363 ctaagttaatgcagcaggggtttgcttatctgccagctgggatctgcatgtccacgatgg 2422
| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 241 ccaagttaatgcagcagggatttgcttatctgccagctgggatctgtatgtccacaatgg 300
Query: 2423 ggcggcatgtttcatatgagcaagccattgcatggaaagtgcttactgcagaagataaca 2482
|||||||||||||||||||||||| ||| || |||||||||||| ||| ||||||| |
Sbjct: 301 ggcggcatgtttcatatgagcaagtcatcgcctggaaagtgcttgctgaagaagat---a 357
Query: 2483 acactgttcactgcttagctttcactttcataaattggtcatttgtatga 2532
||| |||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 358 acagtgttcattgcttagctttctctttcataaattggtcatttgtatga 407
>gnl|LJGI|TC79185 similar to UniRef100_A7NZJ8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 578
Score = 414 bits (209), Expect = e-114
Identities = 252/265 (95%), Gaps = 1/265 (0%)
Strand = Plus / Plus
Query: 2269 gacatgttggaaacaacgctagtggccttacaagacatcacattggataaaatatttgat 2328
|||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1 gacatgttggaaaccacgctagtggccttaccagacatcaccttggataaaatatttgat 60
Query: 2329 gagtctggacgcaaggcattgtttgcagactttgctaagttaatgcagcaggggtttgct 2388
|||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 gagtctggacgccaggccttgtttgcagactttgctaagttaatgcagccggggtttgct 120
Query: 2389 tatctgccagctgggatctgcatgtccacgatggggcggcatgtttcatatgagcaagcc 2448
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 121 tatctgcccgctgggatctgcatgtccccgatggggcggcatgtttcatatgagccagcc 180
Query: 2449 attgca-tggaaagtgcttactgcagaagataacaacactgttcactgcttagctttcac 2507
||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 181 cttgcactggaaagtgcttactgcagaagataaccaccctgttcactgcttagctttcac 240
Query: 2508 tttcataaattggtcatttgtatga 2532
|||||||||||||||||||||||||
Sbjct: 241 tttcataaattggtcatttgtatga 265
>gnl|LJGI|AV781096 homologue to UniRef100_A7NZJ8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 497
Score = 408 bits (206), Expect = e-113
Identities = 209/210 (99%)
Strand = Plus / Plus
Query: 1 atggctatggctgtggctcaacatagaggtgaaagcagcagcagtggtagcattgataag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atggctatggctgtggctcaacatagaggtgaaagcagcagcagtggtagcattgataag 347
Query: 61 caccttgatggtgggaaatatgtgaggtacactgctgaacaagttgaggctcttgaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 348 caccttgatggtgggaaatatgtgaggtacactgctgaacaagttgaggctctggaaagg 407
Query: 121 gtttatgctgagtgccccaagcctagttccctcaggagacagcaacttatcagagagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gtttatgctgagtgccccaagcctagttccctcaggagacagcaacttatcagagagtgt 467
Query: 181 cctattctttccaacattgagcctaagcaa 210
||||||||||||||||||||||||||||||
Sbjct: 468 cctattctttccaacattgagcctaagcaa 497
>gnl|LJGI|BP056674 similar to UniRef100_Q5D1M5 Cluster: Class III HD-Zip protein 2;
n=1; Populus trichocarpa|Rep: Class III HD-Zip protein 2
- Populus trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (18%)
Length = 553
Score = 244 bits (123), Expect = 2e-63
Identities = 371/453 (81%), Gaps = 3/453 (0%)
Strand = Plus / Plus
Query: 72 tgggaaatatgtgaggtacactgctgaacaagttgaggctcttgaaagggtttatgctga 131
||||||||||||| ||||||| || | || || || ||| | ||| |||||||| ||||
Sbjct: 101 tgggaaatatgtgcggtacaccgcggggcaggtggaagctttggaacgggtttatactga 160
Query: 132 gtgccccaagcctagttccctcaggagacagcaacttatcagagagtgtcctattctttc 191
||| || ||||||||||| | ||||| ||||| || ||| | || || || |||| |
Sbjct: 161 gtgtccaaagcctagttctttgaggaggcagcagctgatccgtgaatgcccggttctcgc 220
Query: 192 caacattgagcctaagcaaatcaaggtttggtttcagaatcgcaggtgtagagagaagca 251
|| |||| || ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 221 gaatgttgaaccgaagcagatcaaagtttggtttcagaatcgcaggtgtagagagaagca 280
Query: 252 gagaaaagaggcttcaaggcttcagacggtgaaccgaaaactctcagcaatgaacaagtt 311
||||||||||||||| ||||||||| | |||||||| || || ||||||||||| ||
Sbjct: 281 gagaaaagaggcttctaggcttcaggctgtgaaccggaagctgaatgcaatgaacaaatt 340
Query: 312 gttgatggaggaaaatgatcggttgcagaaacaggtatcacagcttgtatgcgagaatgg 371
|||||||||||| ||||||||||||||||||||||| |||||| | || || ||||||||
Sbjct: 341 gttgatggaggagaatgatcggttgcagaaacaggtgtcacagttggtgtgtgagaatgg 400
Query: 372 gttcatgcggcaacaattgcacactacaccaggagc---aaacactgatgctagttgtga 428
||| ||||| || |||||||| || | ||| ||| || ||||||| | | ||||
Sbjct: 401 gtttatgcgccagcaattgcaagctccgtcagcagctggaactactgatggcaatggtga 460
Query: 429 ttcggtggttactactcctcaacataccatgagagatgctaataaccctgctggactcct 488
|||||||| ||||||| ||| || | |||||||||||||||| ||||||||| ||||
Sbjct: 461 ttcggtggctactacttctcggaattctatgagagatgctaatagtcctgctggattcct 520
Query: 489 atcaattgcagaggagactttgacagagttcct 521
|||||||||||||||||| || ||||||||||
Sbjct: 521 atcaattgcagaggagaccttagcagagttcct 553
>gnl|LJGI|TC70081 homologue to UniRef100_A8E664 Cluster: Class III HD-Zip protein
CNA2; n=1; Medicago truncatula|Rep: Class III HD-Zip
protein CNA2 - Medicago truncatula (Barrel medic),
partial (20%)
Length = 652
Score = 85.7 bits (43), Expect = 1e-15
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 182 ctattctttccaacattgagcctaagcaaatcaaggtttggtttcagaatcgcaggtgta 241
||||||| |||||||||||||||| ||| ||||| |||||||| ||||| | || ||||
Sbjct: 495 ctattctctccaacattgagcctaggcagatcaaagtttggttccagaacagaagatgta 554
Query: 242 gagagaagcagagaaaaga 260
|||||||||||||||||||
Sbjct: 555 gagagaagcagagaaaaga 573