Miyakogusa Predicted Gene
- Lj3g3v3085460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3085460.1 Non Chatacterized Hit- tr|I1LR43|I1LR43_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.48,0,seg,NULL;
Auxin_resp,Auxin response factor; B3,B3 DNA binding domain;
AUX_IAA,AUX/IAA protein; IAA_A,CUFF.45257.1
(2049 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78692 similar to UniRef100_A7NZK3 Cluster: Chromosome... 1558 0.0
gnl|LJGI|TC74139 similar to UniRef100_A7NZK3 Cluster: Chromosome... 472 e-132
gnl|LJGI|TC73256 similar to UniRef100_A7NZK3 Cluster: Chromosome... 240 3e-62
gnl|LJGI|TC75580 similar to UniRef100_A7NZK3 Cluster: Chromosome... 188 9e-47
gnl|LJGI|TC64983 similar to UniRef100_A7PT37 Cluster: Chromosome... 78 2e-13
gnl|LJGI|BP085371 similar to UniRef100_A2Q4T9 Cluster: Protein k... 56 9e-07
gnl|LJGI|CN825794 similar to UniRef100_A7PT37 Cluster: Chromosom... 54 4e-06
>gnl|LJGI|TC78692 similar to UniRef100_A7NZK3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 794
Score = 1558 bits (786), Expect = 0.0
Identities = 792/794 (99%)
Strand = Plus / Plus
Query: 1134 gtggttggttgaattggtatcgaacatgccagccatccatttcacacccttctctccacc 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggttggttgaattggtatcgaacatgccagccatccatttcacacccttctctccacc 60
Query: 1194 gagaaagaagctgcggtttccgcagcaccccgacttcccccttgatgttcgttttccgac 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaaagaagctgcggtttccgcagcaccccgacttcccccttgatgttcgttttccgac 120
Query: 1254 accaacgttttcaggcaaccagctcgggccaaacgtgcccttgatctgtttatctgataa 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accaacgttttcaggcaaccagctcgggccaaacgtgcccttgatctgtttatctgataa 180
Query: 1314 tgctcctgcaagcatacagggagccaggcatgctcaaattggaatatctctatcagatat 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgctcctgcaagcatacagggagccaggcatgctcaaattggaatatctctatcagatat 240
Query: 1374 ccaccttagcaataaactacagttggggttgtttccaactaacatccagcttcatagtgg 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaccttagcaataaactacagttggggttgtttccaactaacatccagcttcatagtgg 300
Query: 1434 gatttcaaatggcaacatgaccaaccatgatgagagcaaggaaagcttatcatgcttgct 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatttcaaatggcaacatgaccaaccatgatgagagcaaggaaagcttatcatgcttgct 360
Query: 1494 gaccatgggaaaatctattaaaagtttggagaaatctgttgatgttaagaaacaccaatt 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaccatgggaaaatctattaaaagtttggagaaatctgttgatgttaagaaacaccaatt 420
Query: 1554 tttgcttttcggtcaaccgatactcactgagcaacaaatctctaatagctgctctagaga 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttgcttttcggtcaaccgatactcactgagcaacaaatctctaatagctgctctagaga 480
Query: 1614 agtgttgtctcataataattcaggaaaaaattcactagctgtgaatgaggacaaagagaa 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtgttgtctcataataattcaggaaaaaattcactagctgtgaatgaggacaaagagaa 540
Query: 1674 gtgcttttttgattcaccaggaaaagcttctagtgctgagttttcttggcaacttggctt 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgcttttttgattcaccaggaaaagcttctagtgctgagttttcttggcaacttggctt 600
Query: 1734 ggatactggtcattgcaaggttttcttggaatcagaagatgtaggaagaagcctagactt 1793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggatactggtcattgcaaggttttcttggaatcagaagatgtaggaagaagcctagactt 660
Query: 1794 atcatgtcttggttcttatgaagagctgtacatgcgacttgccaatttgtttggcttaga 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atcatgtcttggttcttatgaagagctgtacatgcgacttgccaatttgtttggcttaga 720
Query: 1854 aagatctgagatgttgaaccatgtcctctaccgcgatgcaactggtgctgttaagcaaac 1913
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aagatctgagatgttggaccatgtcctctaccgcgatgcaactggtgctgttaagcaaac 780
Query: 1914 tggagaagaacctt 1927
||||||||| ||||
Sbjct: 781 tggagaagaccctt 794
>gnl|LJGI|TC74139 similar to UniRef100_A7NZK3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 617
Score = 472 bits (238), Expect = e-132
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 1 atgaaggaaggtgagaagagcttggatccgcaactatggcacgcgtgtgcaggtggaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgaaggaaggtgagaagagcttggatccgcaactatggcacgcgtgtgcaggtggaatg 439
Query: 61 gttcaaatgcctcaggtgaactccagagttttctactttccacaagggcatgcggaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gttcaaatgcctcaggtgaactccagagttttctactttccacaagggcatgcggaacat 499
Query: 121 gctcacaccaacgttgatctgagaggttcattgccaccgttcatcctctgcaacgttgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctcacaccaacgttgatctgagaggttcattgccaccgttcatcctctgcaacgttgca 559
Query: 181 gcagtgaaattcatggctgacccagaaaccgatgaggttttcgccaagatgaggctcg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcagtgaaattcatggctgacccagaaaccgatgaggttttcgccaagatgaggctcg 617
>gnl|LJGI|TC73256 similar to UniRef100_A7NZK3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 718
Score = 240 bits (121), Expect = 3e-62
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 1929 cagtgatttcatgaagacagcaaaaagattgacaattttgactgactcaggcagcaaaag 1988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cagtgatttcatgaagacagcaaaaagattgacaattttgactgactcaggcagcaaaag 249
Query: 1989 tattagggcctggattacaggaactcggaatggtgaacatggattggatgcatcaaatca 2048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tattagggcctggattacaggaactcggaatggtgaacatggattggatgcatcaaatca 309
Query: 2049 a 2049
|
Sbjct: 310 a 310
Score = 58.0 bits (29), Expect = 2e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1903 gttaagcaaactggagaagaacctttcag 1931
|||||||||||||||||||||||||||||
Sbjct: 1 gttaagcaaactggagaagaacctttcag 29
>gnl|LJGI|TC75580 similar to UniRef100_A7NZK3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (15%)
Length = 561
Score = 188 bits (95), Expect = 9e-47
Identities = 258/311 (82%), Gaps = 6/311 (1%)
Strand = Plus / Plus
Query: 1742 gtcattgcaaggttttcttggaatcagaagatgtaggaagaagcctagacttatcatgtc 1801
|||||||||||||||||||||| ||||||||||| ||||||| || ||| | ||| ||
Sbjct: 1 gtcattgcaaggttttcttggagtcagaagatgtgggaagaacactggacctgtcacgtg 60
Query: 1802 ttggttcttatgaagagctgtacatgcgacttgccaatttgtttggcttagaaagatctg 1861
||||||||||||||||||| || | | |||| ||||| ||||||| | ||||| ||||
Sbjct: 61 ttggttcttatgaagagctttataggagactggccaacatgtttggaatggaaaggtctg 120
Query: 1862 agatgttgaaccatgtcctctaccgcgatgcaactggtgctgttaagcaaactggagaag 1921
|| |||||| ||||| |||||||| || | || ||||||||||| || ||||| ||||
Sbjct: 121 agctgttgagtcatgtgctctaccgtgactccacaggtgctgttaaacatactggtgaag 180
Query: 1922 aacctttcagtgatttcatgaagacagcaaaaagattgacaattttgactgact---cag 1978
|||| |||||||| |||||||||||||||||||||||||| ||| |||| || | |||
Sbjct: 181 aacccttcagtgacttcatgaagacagcaaaaagattgaccattctgacagattctgcag 240
Query: 1979 gcagcaaa---agtattagggcctggattacaggaactcggaatggtgaacatggattgg 2035
|||||||| | || |||| || ||||||||||||| |||||| ||||| ||||||||
Sbjct: 241 gcagcaaagatactagaagggtcttgattacaggaactaggaatgctgaacgtggattgg 300
Query: 2036 atgcatcaaat 2046
|||| ||||||
Sbjct: 301 atgcgtcaaat 311
>gnl|LJGI|TC64983 similar to UniRef100_A7PT37 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 715
Score = 77.8 bits (39), Expect = 2e-13
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 316 tttgctaagactttgacccaatcggatgctaacaatggtggggggttttctgttccgagg 375
||||| ||||||||||| ||||| ||||||||||||||||| || ||||||||||| |
Sbjct: 629 tttgccaagactttgactcaatctgatgctaacaatggtggaggcttttctgttcctcgt 688
Query: 376 tactgtgcggagacaatttttcc 398
|| ||||| ||||| ||||||||
Sbjct: 689 tattgtgctgagaccatttttcc 711
>gnl|LJGI|BP085371 similar to UniRef100_A2Q4T9 Cluster: Protein kinase; n=1; Medicago
truncatula|Rep: Protein kinase - Medicago truncatula
(Barrel medic), partial (4%)
Length = 419
Score = 56.0 bits (28), Expect = 9e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1820 tgtacatgcgacttgccaatttgtttggcttagaaagatctgagatgttgaaccatgtcc 1879
|||||| | |||| ||||| ||||||||||||||| || ||||||||||| ||||| |
Sbjct: 129 tgtacaggggactggccaacatgtttggcttagaaatattggagatgttgaatcatgtgc 188
Query: 1880 tctaccgcgatgcaac 1895
|||||| ||||||||
Sbjct: 189 tctaccatgatgcaac 204
>gnl|LJGI|CN825794 similar to UniRef100_A7PT37 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 212
Score = 54.0 bits (27), Expect = 4e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 952 tctgggatgaggttcaagatgccctttgaaactgaggactctt 994
||||||||||||||||||||| |||| ||||| ||||| ||||
Sbjct: 170 tctgggatgaggttcaagatggccttcgaaaccgaggattctt 212