Miyakogusa Predicted Gene

Lj3g3v3084420.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3084420.1 Non Chatacterized Hit- tr|F6GU16|F6GU16_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,88.3,0,Nucleotide-diphospho-sugar transferases,NULL;
seg,NULL,CUFF.45234.1
         (2058 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS358252 similar to UniRef100_A7NZL0 Cluster: Chromosom...    80   6e-14

>gnl|LJGI|FS358252 similar to UniRef100_A7NZL0 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (4%)
          Length = 430

 Score = 79.8 bits (40), Expect = 6e-14
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1950 tgctggagctaagttgggtcaggatgtgctgagatgtgacaatgccactgagctagttgt 2009
            |||||||||||||||||| || |||||||| ||||||||||||||||||||  | || | 
Sbjct: 411  tgctggagctaagttgggccaagatgtgcttagatgtgacaatgccactgaaattgtagc 352

                                        
Query: 2010 tgttgatcaagatacagggctaccacac 2037
            ||| ||||| |||||||| || ||||||
Sbjct: 351  tgtggatcatgatacaggtctgccacac 324