Miyakogusa Predicted Gene
- Lj3g3v3056700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3056700.1 tr|H2BER4|H2BER4_SOYBN 4-coumarate:CoA ligase
OS=Glycine max GN=4CL PE=2 SV=1,88.89,0,SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; Acetyl-CoA synthetase-like,NULL;
AMP-binding,AMP-de,NODE_19319_length_1537_cov_175.108002.path2.1
(978 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023895 similar to UniRef100_A7PQS6 Cluster: Chromosom... 769 0.0
gnl|LJGI|TC74131 similar to UniRef100_A7PQS6 Cluster: Chromosome... 420 e-117
gnl|LJGI|TC79411 similar to UniRef100_A7PQS6 Cluster: Chromosome... 196 2e-49
>gnl|LJGI|GO023895 similar to UniRef100_A7PQS6 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 554
Score = 769 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Plus
Query: 591 ggggtgggtacatacaggagatcttggatattttgatgaggatggacaactttttgttgt 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggggtgggtacatacaggagatcttggatattttgatgaggatggacaactttttgttgt 60
Query: 651 tgaccgtatcaaagaacttatcaagtataaagggttccaggttgcgccagcagaacttga 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaccgtatcaaagaacttatcaagtataaagggttccaggttgcgccagcagaacttga 120
Query: 711 agggcttcttgtttctcatcctgaaatacttgacgctgttgttatcccataccctgatgc 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agggcttcttgtttctcatcctgaaatacttgacgctgttgttatcccataccctgatgc 180
Query: 771 tgaagctggtgaggttccagttgcctatgtcgttcgttcacccaatagttcactaaccga 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaagctggtgaggttccagttgcctatgtcgttcgttcacccaatagttcactaaccga 240
Query: 831 ggaagatgttcaaaagttcattgctaatcaggtagcacccttcaaaaaattgagaagggt 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaagatgttcaaaagttcattgctaatcaggtagcacccttcaaaaaattgagaagggt 300
Query: 891 gacattcatcaacactgttcctaagacagcatcaggaaaaattcttcgaagagagctcat 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacattcatcaacactgttcctaagacagcatcaggaaaaattcttcgaagagagctcat 360
Query: 951 tgacaaagcacgatccaaaatataacaa 978
||||||||||||||||||||||||||||
Sbjct: 361 tgacaaagcacgatccaaaatataacaa 388
>gnl|LJGI|TC74131 similar to UniRef100_A7PQS6 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 655
Score = 420 bits (212), Expect = e-117
Identities = 377/432 (87%)
Strand = Plus / Plus
Query: 544 ggttatcacaacaatccacaggccactagattgactatagataaacaggggtgggtacat 603
|||||||| ||||||||| | ||||| | ||||||| | |||||| |||| |||||||||
Sbjct: 16 ggttatcataacaatccagaagccacaaaattgactttggataaaaagggatgggtacat 75
Query: 604 acaggagatcttggatattttgatgaggatggacaactttttgttgttgaccgtatcaaa 663
||||||||| ||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 76 acaggagatgttggatattttgatgaggatggacagctctatgttgttgaccgtatcaaa 135
Query: 664 gaacttatcaagtataaagggttccaggttgcgccagcagaacttgaagggcttcttgtt 723
||||| |||||||||||||| || |||||||| ||||||||||||||||||||||| |||
Sbjct: 136 gaactaatcaagtataaaggttttcaggttgcaccagcagaacttgaagggcttctagtt 195
Query: 724 tctcatcctgaaatacttgacgctgttgttatcccataccctgatgctgaagctggtgag 783
||||||||||||||||| || |||| ||| ||||||| || |||| ||| ||||||||
Sbjct: 196 tctcatcctgaaatactagatgctgctgtcgtcccatatccggatgatgaggctggtgaa 255
Query: 784 gttccagttgcctatgtcgttcgttcacccaatagttcactaaccgaggaagatgttcaa 843
|||||| |||||||||| ||||||||||||||||||||||| || ||| || | ||||
Sbjct: 256 gttccaattgcctatgttgttcgttcacccaatagttcactgactgagaaacaaattcag 315
Query: 844 aagttcattgctaatcaggtagcacccttcaaaaaattgagaagggtgacattcatcaac 903
| || ||||||| |||||| ||||| ||||||||||||||||||||||||||||||| |
Sbjct: 316 gaatttattgctagtcaggttgcacctttcaaaaaattgagaagggtgacattcatcagc 375
Query: 904 actgttcctaagacagcatcaggaaaaattcttcgaagagagctcattgacaaagcacga 963
| |||||| |||||||| ||||||||| |||| |||||||||| |||| |||||| |
Sbjct: 376 agtgttccaaagacagcttcaggaaaacttctcagaagagagcttattgctaaagcaaaa 435
Query: 964 tccaaaatataa 975
||||||||||||
Sbjct: 436 tccaaaatataa 447
>gnl|LJGI|TC79411 similar to UniRef100_A7PQS6 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 391
Score = 196 bits (99), Expect = 2e-49
Identities = 280/339 (82%), Gaps = 1/339 (0%)
Strand = Plus / Plus
Query: 43 gtgtttctctgcgttttgccgatgtttcatgtgtttgggtttgcggttatcacgtactcg 102
||||||||||||||||||||||||||||||||||||||| |||| | || || || ||
Sbjct: 5 gtgtttctctgcgttttgccgatgtttcatgtgtttgggcttgctatcataacttatgcg 64
Query: 103 cagcttatgagagggaatgc-ggtggtgtcgttgaagaggtttgagtttgagctggtttt 161
||| | | |||| ||| |||||||||| || |||||||||||||||| | | |
Sbjct: 65 gcgctccggcgggggagtgccggtggtgtcgatggggaggtttgagtttgaggcgttgct 124
Query: 162 gaagacggtggagaagtataaggtgacgcatttgtgggttgtgcctccgattgtgcttgc 221
|| | ||||||||||| ||||||||||| || | ||||| || |||||||| ||||||||
Sbjct: 125 gagggcggtggagaagcataaggtgacgaatctctgggtggttcctccgatggtgcttgc 184
Query: 222 tttggcgaagcatggtttggttgataagtatgatctttcttcgttgaagcatattggttc 281
| ||||||| || || |||||| |||||||||||||| ||||||||| ||||||| ||
Sbjct: 185 tctggcgaaacagagtgtggttgggaagtatgatctttcgtcgttgaagtatattgggtc 244
Query: 282 tggtgctgcacctcttgggaaagagttgatggaggagtgtgccaagcgtttccctaatgt 341
|||||||| |||||||||||||||||||||||||||||||| | | || ||| ||||
Sbjct: 245 aggtgctgctcctcttgggaaagagttgatggaggagtgtgctaggaagttacctcatgt 304
Query: 342 cattgtttgtcagggttatggtatgactgagacttgtgg 380
|||||||||||| ||||||||||| || ||||||||
Sbjct: 305 ttctgtttgtcagggctatggtatgacagaaacttgtgg 343