Miyakogusa Predicted Gene
- Lj3g3v3053420.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3053420.2 Non Chatacterized Hit- tr|C6TGZ1|C6TGZ1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56817
PE,93.96,0,coiled-coil,NULL; Snf7,Snf7; CHARGED MULTIVESICULAR BODY
PROTEIN 3,NULL; CHARGED MULTIVESICULAR BODY,CUFF.45199.2
(450 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60521 similar to UniRef100_Q10SX2 Cluster: SNF7 famil... 892 0.0
gnl|LJGI|FS342934 similar to UniRef100_A9SKY2 Cluster: Predicted... 835 0.0
>gnl|LJGI|TC60521 similar to UniRef100_Q10SX2 Cluster: SNF7 family protein,
expressed; n=1; Oryza sativa Japonica Group|Rep: SNF7
family protein, expressed - Oryza sativa subsp. japonica
(Rice), partial (82%)
Length = 1111
Score = 892 bits (450), Expect = 0.0
Identities = 450/450 (100%)
Strand = Plus / Plus
Query: 1 atggagaaggtgataaacattctgaaaccaaagccaaatccacagcaactgctgagggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atggagaaggtgataaacattctgaaaccaaagccaaatccacagcaactgctgagggat 242
Query: 61 tggcaacgcaagcttcgccaagagtgccgcaacgttgagcgccaaattcgcgatattcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tggcaacgcaagcttcgccaagagtgccgcaacgttgagcgccaaattcgcgatattcag 302
Query: 121 agagaagaaaaaagtgtgcagaaagcgattagagaagctgctaagaggaatgatatgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agagaagaaaaaagtgtgcagaaagcgattagagaagctgctaagaggaatgatatgggc 362
Query: 181 tctgcaaaggcacttgctaaggaacttgtgagatctaggaaaacggtgaaccgtcttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tctgcaaaggcacttgctaaggaacttgtgagatctaggaaaacggtgaaccgtcttcat 422
Query: 241 gaaaataaggcacaattgaattcaatatcaatgcatcttggagagagtgttgcaattgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaaaataaggcacaattgaattcaatatcaatgcatcttggagagagtgttgcaattgct 482
Query: 301 cgtactgtggggcatctatctaagagtgctgaggttatgaagcttgttaatgaccttatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cgtactgtggggcatctatctaagagtgctgaggttatgaagcttgttaatgaccttatg 542
Query: 361 aaggctcctcaaatggctgtgacaatgcaagaattcagcaaagaaatgacaaaggcaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aaggctcctcaaatggctgtgacaatgcaagaattcagcaaagaaatgacaaaggcaggc 602
Query: 421 gttattgaggaaatggtgaatgatgctgtc 450
||||||||||||||||||||||||||||||
Sbjct: 603 gttattgaggaaatggtgaatgatgctgtc 632
>gnl|LJGI|FS342934 similar to UniRef100_A9SKY2 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(78%)
Length = 779
Score = 835 bits (421), Expect = 0.0
Identities = 442/450 (98%), Gaps = 8/450 (1%)
Strand = Plus / Plus
Query: 1 atggagaaggtgataaacattctgaaaccaaagccaaatccacagcaactgctgagggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 atggagaaggtgataaacattctgaaaccaaagccaaatccacagcaactgctgagggat 284
Query: 61 tggcaacgcaagcttcgccaagagtgccgcaacgttgagcgccaaattcgcgatattcag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tggcaacgcaagcttcgccaagagtgccgcaacgttgagcgccaaattcgcga------- 337
Query: 121 agagaagaaaaaagtgtgcagaaagcgattagagaagctgctaagaggaatgatatgggc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 -gagaagaaaaaagtgtgcagaaagcgattagagaagctgctaagaggaatgatatgggc 396
Query: 181 tctgcaaaggcacttgctaaggaacttgtgagatctaggaaaacggtgaaccgtcttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tctgcaaaggcacttgctaaggaacttgtgagatctaggaaaacggtgaaccgtcttcat 456
Query: 241 gaaaataaggcacaattgaattcaatatcaatgcatcttggagagagtgttgcaattgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaaaataaggcacaattgaattcaatatcaatgcatcttggagagagtgttgcaattgct 516
Query: 301 cgtactgtggggcatctatctaagagtgctgaggttatgaagcttgttaatgaccttatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cgtactgtggggcatctatctaagagtgctgaggttatgaagcttgttaatgaccttatg 576
Query: 361 aaggctcctcaaatggctgtgacaatgcaagaattcagcaaagaaatgacaaaggcaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aaggctcctcaaatggctgtgacaatgcaagaattcagcaaagaaatgacaaaggcaggc 636
Query: 421 gttattgaggaaatggtgaatgatgctgtc 450
||||||||||||||||||||||||||||||
Sbjct: 637 gttattgaggaaatggtgaatgatgctgtc 666