Miyakogusa Predicted Gene
- Lj3g3v3033310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3033310.1 Non Chatacterized Hit- tr|Q8L8B0|Q8L8B0_ARATH
Putative uncharacterized protein At2g28140/F24D13.7
OS,54.55,3e-19,DUF1635,Protein of unknown function DUF1635;
seg,NULL,CUFF.45184.1
(450 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV422895 similar to UniRef100_A7PQQ1 Cluster: Chromosom... 192 1e-48
gnl|LJGI|AV764915 weakly similar to UniRef100_A7PQQ1 Cluster: Ch... 172 1e-42
gnl|LJGI|TC67793 similar to UniRef100_A7PQQ1 Cluster: Chromosome... 157 7e-38
>gnl|LJGI|AV422895 similar to UniRef100_A7PQQ1 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 477
Score = 192 bits (97), Expect = 1e-48
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 atgaccccaggagaggaattgactccaacaatggcctttcatcatcagattgtgaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaccccaggagaggaattgactccaacaatggcctttcatcatcagattgtgaagaaa 440
Query: 61 gcattgtttcctctccagttattgaccattttcacca 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcattgtttcctctccagttattgaccattttcacca 477
>gnl|LJGI|AV764915 weakly similar to UniRef100_A7PQQ1 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 238
Score = 172 bits (87), Expect = 1e-42
Identities = 138/155 (89%)
Strand = Plus / Minus
Query: 291 ccaagattcctttaacactaacgggcgcactggcggcaccggcaccggcaccggcaccgc 350
||||||||||||| || |||||||| || |||||||||| ||| | ||||| ||| ||||
Sbjct: 232 ccaagattccttttactctaacgggagccctggcggcacgggcccgggcacgggccccgc 173
Query: 351 caccgccaccaactgtggaaggttcagcagaaaaagagtactctgtgatggatctgattc 410
| ||||| ||||||||||||||||||||| ||||| || ||||||||| |||| ||||||
Sbjct: 172 ccccgcccccaactgtggaaggttcagcaaaaaaaaagaactctgtgagggatttgattc 113
Query: 411 ccctgcagaaaccaagtaccagaggattgtactcc 445
||||||||||||||||||||| |||||||||||||
Sbjct: 112 ccctgcagaaaccaagtaccaaaggattgtactcc 78
>gnl|LJGI|TC67793 similar to UniRef100_A7PQQ1 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 891
Score = 157 bits (79), Expect = 7e-38
Identities = 124/139 (89%)
Strand = Plus / Plus
Query: 110 caccagataagcctttaccagagaagggaaagctcttacaagcagtgatgaaagcaggtc 169
||||||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||| || |
Sbjct: 541 caccagaaaagccattaccagaaaagggtaagcttttacaggcagtgatgaaagctggcc 600
Query: 170 ctctgcttcagactctgctccttgcaggaccacttcctcagtggagacacccgccaccgc 229
|||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |
Sbjct: 601 ctctgcttcagactctgctcctggcagggccacttcctcaatggagacacccaccaccac 660
Query: 230 cactggaatcctttgagat 248
|||| || |||||||||||
Sbjct: 661 cacttgagtcctttgagat 679
Score = 129 bits (65), Expect = 2e-29
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 1 atgaccccaggagaggaattgactccaacaatggcctttcatcatcagattgtgaagaaa 60
|||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 391 atgaacccagaagaggaattgactccaacaatggcctctcttcatcagattgtgaagaaa 450
Query: 61 gcattgtttcctctccagttattga 85
|||||||||||||||||||| ||||
Sbjct: 451 gcattgtttcctctccagtttttga 475