Miyakogusa Predicted Gene
- Lj3g3v3033280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3033280.1 Non Chatacterized Hit- tr|I1LR89|I1LR89_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32756
PE,86.93,0,seg,NULL; DUF966,Protein of unknown function DUF966; FAMILY
NOT NAMED,NULL,CUFF.45180.1
(1578 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81062 1082 0.0
gnl|LJGI|DC599265 similar to UniRef100_A7NT66 Cluster: Chromosom... 379 e-104
gnl|LJGI|BP044172 UniRef100_A7NT66 Cluster: Chromosome chr18 sca... 254 1e-66
gnl|LJGI|TC70292 115 9e-25
>gnl|LJGI|TC81062
Length = 930
Score = 1082 bits (546), Expect = 0.0
Identities = 594/615 (96%), Gaps = 20/615 (3%)
Strand = Plus / Plus
Query: 984 gatctcatgtggctcgatatcagtgaaaaaccacagttttggccttattccttcctataa 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatctcatgtggctcgatatcagtgaaaaaccacagttttggccttattccttcctataa 60
Query: 1044 gcataggttttctgattcaaaattcccttctccgctgttctccacttcttttatgttagg 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcataggttttctgattcaaaattcccttctccgctgttctccacttcttttatgttagg 120
Query: 1104 ggaatttgattgcttagcagagaatccaaagctgatgaatcttaggttggaagacaaaga 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaatttgattgcttagcagagaatccaaagctgatgaatcttaggttggaagacaaaga 180
Query: 1164 atactttagtgggagcttaattgagactaaactgaaggaaggagaggcacataaagttct 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atactttagtgggagcttaattgagactaaactgaaggaaggagaggcacataaagttct 240
Query: 1224 gaaacgttcttcttcctacaatgatgaaaggacatataaagaccagaaaccacaagaaga 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaacgttcttcttcctacaatgatgaaaggacatataaagaccagaaaccacaagaaga 300
Query: 1284 caaagaggaaacatcctcaggacattcaaaatgcattccacgatcaatcaaggcttcatt 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaagaggaaacatcctcaggacattcaaaatgcattccacgatcaatcaaggcttcatt 360
Query: 1344 gaccaagcatccacgaagcgaatccatgaaatcccccgtttctgatgggccaagaaactc 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaccaagcatccacgaagcgaatccatgaaatcccccgtttctgatgggccaagaaactc 420
Query: 1404 atcggacagatttgatggatcaggcatatcctcagtaacatctaacggtagcagcaaaag 1463
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcggacggatttgatggatcaggcatatcctcagtaacatctaacggtagcagcaaaag 480
Query: 1464 aatctccgaaccttcatcagggaagaagcagtcaaagaggatagattcgtttagggaaga 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatctccgaaccttcatcagggaagaagcagtcaaagaggatagattcgtttagggaaga 540
Query: 1524 ag--------------------aggcttgcttcaggagctcgggttataatccaatcatc 1563
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaggtgatcaaaatagaagaaaggcttgcttcaggagctcgggttataatccaatcatc 600
Query: 1564 caaaccattttgtga 1578
|||||||||||||||
Sbjct: 601 caaaccattttgtga 615
>gnl|LJGI|DC599265 similar to UniRef100_A7NT66 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 566
Score = 379 bits (191), Expect = e-104
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 1 atggaagcgcggatgaagaagtataggcaacaagtgagtcctgagagggccaaagtgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atggaagcgcggatgaagaagtataggcaacaagtgagtcctgagagggccaaagtgtgg 435
Query: 61 actgagaagtcacctaagtaccatcagagtctgaaggttcctgtgatttactatctctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 actgagaagtcacctaagtaccatcagagtctgaaggttcctgtgatttactatctctgt 495
Query: 121 aggaataggcagctggagcaccctcatttcatggaggtccctctttcttccccagatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aggaataggcagctggagcaccctcatttcatggaggtccctctttcttccccagatggg 555
Query: 181 ctgtacttgag 191
|||||||||||
Sbjct: 556 ctgtacttgag 566
>gnl|LJGI|BP044172 UniRef100_A7NT66 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (12%)
Length = 220
Score = 254 bits (128), Expect = 1e-66
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 1 atggaagcgcggatgaagaagtataggcaacaagtgagtcctgagagggccaaagtgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 atggaagcgcggatgaagaagtataggcaacaagtgagtcctgagagggccaaagtgtgg 152
Query: 61 actgagaagtcacctaagtaccatcagagtctgaaggttcctgtgatttactatctctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 actgagaagtcacctaagtaccatcagagtctgaaggttcctgtgatttactatctctgt 212
Query: 121 aggaatag 128
||||||||
Sbjct: 213 aggaatag 220
>gnl|LJGI|TC70292
Length = 715
Score = 115 bits (58), Expect = 9e-25
Identities = 103/118 (87%)
Strand = Plus / Plus
Query: 262 agaagctacaagagtggatttgtgtggcatgatctttctgaagatgatttaattttacca 321
||||||||||||| ||||||||||||||||||||| | ||||||||| | |||||||
Sbjct: 133 agaagctacaagaatggatttgtgtggcatgatctctgcgaagatgataaatctttacca 192
Query: 322 gcacatggaaatgagtatgtcctcaaaggctctgagctctttgatgaatccaattcag 379
| ||||||||| || |||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 193 tcccatggaaataagaatgtcctcaaaggctctgagctctttgacaaatccaactcag 250