Miyakogusa Predicted Gene
- Lj3g3v3033250.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3033250.2 tr|Q7XVB7|Q7XVB7_ORYSJ OSJNBa0072D21.7 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0072D21.7
PE,34.96,2e-18,seg,NULL; EGL3 (ENHANCER OF GLABRA3), DNA BINDING /
TRANSCRIPTION FACTOR,NULL; MYC,NULL; HLH, helix-,CUFF.45205.2
(882 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011352 similar to UniRef100_A7PQP7 Cluster: Chromosom... 1394 0.0
gnl|LJGI|TC57198 similar to UniRef100_A7PQP7 Cluster: Chromosome... 260 1e-68
>gnl|LJGI|GO011352 similar to UniRef100_A7PQP7 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 733
Score = 1394 bits (703), Expect = 0.0
Identities = 727/731 (99%), Gaps = 3/731 (0%)
Strand = Plus / Plus
Query: 1 atggtcacaatggattttcatcaacagaatcagaatctagcgcatgttaatgactttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 atggtcacaatggattttcatcaacagaatcagaatctagcgcatgttaatgactttgaa 65
Query: 61 ctgcacagcttcgtggaagatcccaactttgatcagtttatcaatatgattcgtggggag 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 66 ctgcacagcttcgtggaagatcccagctttgatcagtttatcaatatgattcgtggggag 125
Query: 121 aatgaagctgctgctatctgtgacttcaattctgacattttgaatggttactatgttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aatgaagctgctgctatctgtgacttcaattctgacattttgaatggttactatgttgat 185
Query: 181 aacacattccactcattccctgcaaaccaatttgatcaatgcaatagtaacaattctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aacacattccactcattccctgcaaaccaatttgatcaatgcaatagtaacaattctgtg 245
Query: 241 agagtttatgatcctagctcaacacttagctccttgtcatgttttgatgaagaagccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 agagtttatgatcctagctcaacacttagctccttgtcatgttttgatgaagaagccaaa 305
Query: 301 tggggaggagaagaagaaaatgatggggaggattcttcttctgctggaacaacctccacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tggggaggagaagaagaaaatgatggggaggattcttcttctgctggaacaacctccacc 365
Query: 361 atggaaacaaagattgttaatggtaagtcaaggccaaaaactgataggtccaagactttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 atggaaacaaagattgttaatggtaagtcaaggccaaaaactgataggtccaagactttg 425
Query: 421 atctctgagaggaggaggagaggacgaatgaaggagaagctttatgcattgcgtgccttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 atctctgagaggaggaggagaggacgaatgaaggagaagctttatgcattgcgtgccttg 485
Query: 481 gttcccaacataactaagatggataaggcctctatcattggagatgctgtttcatatgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gttcccaacataactaagatggataaggcctctatcattggagatgctgtttcatatgtg 545
Query: 541 tatgatcttcaagcacaagccaagaagctaaagactgaggttgcaggacttgaagcatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tatgatcttcaagcacaagccaagaagctaaagactgaggttgcaggacttgaagcatcc 605
Query: 601 ttattagtctcccaaaattatcaagcaacaattgaaagccccatgaaggttcaatccact 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 606 ttattagtctcccaaaattatcaagcaacaattgaaagccccatgaa-gttcaatccact 664
Query: 661 gaccacagcagttccatctgcaagaggatcacacagatggacatctttcaagtggatgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 665 gaccacagcagttccatctgcaagaggatcacacagatggacatctttc-agtggatg-a 722
Query: 721 acagagctcta 731
|||||||||||
Sbjct: 723 acagagctcta 733
>gnl|LJGI|TC57198 similar to UniRef100_A7PQP7 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 1365
Score = 260 bits (131), Expect = 1e-68
Identities = 200/223 (89%)
Strand = Plus / Plus
Query: 403 gataggtccaagactttgatctctgagaggaggaggagaggacgaatgaaggagaagctt 462
||||||||||||||| | || | ||||||||| |||||||| |||||||||||||||||
Sbjct: 413 gataggtccaagactctcatttgtgagaggagaaggagaggtagaatgaaggagaagctt 472
Query: 463 tatgcattgcgtgccttggttcccaacataactaagatggataaggcctctatcattgga 522
||||| |||||| | |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 473 tatgctttgcgttctttggttccaaacataactaagatggataaggcctctataattgga 532
Query: 523 gatgctgtttcatatgtgtatgatcttcaagcacaagccaagaagctaaagactgaggtt 582
||||| |||||||| ||| |||| |||||||||||||| |||||||| ||| ||||||||
Sbjct: 533 gatgcagtttcatacgtgcatgaccttcaagcacaagcaaagaagctgaaggctgaggtt 592
Query: 583 gcaggacttgaagcatccttattagtctcccaaaattatcaag 625
|||||||||||||||||||||||||| || ||||||| ||||
Sbjct: 593 gcaggacttgaagcatccttattagtgtctgaaaattaccaag 635
Score = 65.9 bits (33), Expect = 4e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 79 gatcccaactttgatcagtttatcaatatgattcgtggggagaatgaag 127
||||| ||||| ||||||||||||||| ||||||| |||||||||||||
Sbjct: 92 gatccaaacttcgatcagtttatcaatttgattcgaggggagaatgaag 140