Miyakogusa Predicted Gene

Lj3g3v3033230.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3033230.1 Non Chatacterized Hit- tr|D2DW84|D2DW84_PHAVU
Putative F-box family protein OS=Phaseolus vulgaris
PE,59.09,0.00002,F-box domain,F-box domain, cyclin-like; no
description,NULL; FBOX,F-box domain, cyclin-like; seg,NUL,CUFF.45177.1
         (232 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81934 similar to UniRef100_A7QK65 Cluster: Chromosome...    62   2e-09
gnl|LJGI|TC61348 similar to UniRef100_A7QK65 Cluster: Chromosome...    56   1e-07

>gnl|LJGI|TC81934 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_111, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 1384

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 24  tcacattctctccgttctcccaactaaacaagctattgccacaagtgttct 74
           ||||||||||| | ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 109 tcacattctcttctttctctcaactgaacaagctgttgccacaagtgttct 159


>gnl|LJGI|TC61348 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_111, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 1489

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                       
Query: 24  tcacattctctccgttctcccaactaaacaagctattgccacaagtgttctttcacggag 83
           ||||||||||||  |||||| |||  || |||||  |||||||||||||||||||  |||
Sbjct: 202 tcacattctctcttttctccaaacacaagaagctgctgccacaagtgttctttcaaagag 261

                                   
Query: 84  gtggagcctcctgtgtacctcagt 107
           |||||| | ||| || ||||||||
Sbjct: 262 gtggaggcacctatggacctcagt 285