Miyakogusa Predicted Gene
- Lj3g3v3031030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3031030.1 CUFF.45159.1
(1173 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68085 weakly similar to UniRef100_A7PQN7 Cluster: Chr... 1011 0.0
gnl|LJGI|TC69999 weakly similar to UniRef100_A7PQN6 Cluster: Chr... 866 0.0
gnl|LJGI|AV778473 341 6e-93
gnl|LJGI|TC75647 weakly similar to UniRef100_A7QJA9 Cluster: Chr... 52 8e-06
>gnl|LJGI|TC68085 weakly similar to UniRef100_A7PQN7 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 594
Score = 1011 bits (510), Expect = 0.0
Identities = 510/510 (100%)
Strand = Plus / Plus
Query: 1 atggtttcactccatcagttgtccattgatcttttaaaaaagcggagtctttctaccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggtttcactccatcagttgtccattgatcttttaaaaaagcggagtctttctaccaag 144
Query: 61 gaacatgttgatctctgcagtttatgttcaaatggaggggatcttatcagttgtgatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gaacatgttgatctctgcagtttatgttcaaatggaggggatcttatcagttgtgatcgt 204
Query: 121 gataaatgcacaagagcttttcacctaaaatgtgctcgtcttcctcgtataccaagtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gataaatgcacaagagcttttcacctaaaatgtgctcgtcttcctcgtataccaagtggt 264
Query: 181 ttgtggtactgcaaatattgtgagaatgaaactcaggaaaacaaagatgtggaccagggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtggtactgcaaatattgtgagaatgaaactcaggaaaacaaagatgtggaccagggg 324
Query: 241 agaagctttttagtcgaacatgatgagggcggccagtgtgcattgtgcggtggccatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agaagctttttagtcgaacatgatgagggcggccagtgtgcattgtgcggtggccatgat 384
Query: 301 ttcatcaaagacgtctttggtcctcggacagtaatgatttgtgatcagtgtgagaaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcatcaaagacgtctttggtcctcggacagtaatgatttgtgatcagtgtgagaaggaa 444
Query: 361 taccatgtcgagtgcttgaaggatcataacaagcagaacctagagaaattaccggaaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taccatgtcgagtgcttgaaggatcataacaagcagaacctagagaaattaccggaaggt 504
Query: 421 aaatggttctgttgctcagattgtgatcatattcataacgttctggtaaaatatgtggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaatggttctgttgctcagattgtgatcatattcataacgttctggtaaaatatgtggct 564
Query: 481 cgtggggagatgaatcttccagattccctc 510
||||||||||||||||||||||||||||||
Sbjct: 565 cgtggggagatgaatcttccagattccctc 594
>gnl|LJGI|TC69999 weakly similar to UniRef100_A7PQN6 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 665
Score = 866 bits (437), Expect = 0.0
Identities = 440/441 (99%)
Strand = Plus / Plus
Query: 733 gatcatgattttcgcggaatgtattgtgcagtgctcactatcaaccaaatggtggtttgt 792
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 gatcatgattttcgcggaatgtattgtgcagtgctcactatcaacccaatggtggtttgt 60
Query: 793 gcttgtctatttcgtgtgtttgggcaagaagtagcagagcttcccttagtggcaactcgt 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttgtctatttcgtgtgtttgggcaagaagtagcagagcttcccttagtggcaactcgt 120
Query: 853 aaagattaccaaagaaagggttactttcggtccctgttctcttgcattgaaaggatgtta 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagattaccaaagaaagggttactttcggtccctgttctcttgcattgaaaggatgtta 180
Query: 913 ggatgtttaaaggtgaaaaactttgtcctaccagcgacgagggaagctaagtcgctatgg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggatgtttaaaggtgaaaaactttgtcctaccagcgacgagggaagctaagtcgctatgg 240
Query: 973 accaccaaatttgggttctcaaggctgggtagagagaagataaacaactaccaaaaatac 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accaccaaatttgggttctcaaggctgggtagagagaagataaacaactaccaaaaatac 300
Query: 1033 aacaacataatggcatttaagggaacattgtttctccagaagcctattcctcaactacaa 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacaacataatggcatttaagggaacattgtttctccagaagcctattcctcaactacaa 360
Query: 1093 aaaatacaacaacatagtagcatttcaaggaacattctttctctagaagcatattcctgt 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaatacaacaacatagtagcatttcaaggaacattctttctctagaagcatattcctgt 420
Query: 1153 gctgaaatgagggcctaatta 1173
|||||||||||||||||||||
Sbjct: 421 gctgaaatgagggcctaatta 441
>gnl|LJGI|AV778473
Length = 456
Score = 341 bits (172), Expect = 6e-93
Identities = 214/228 (93%)
Strand = Plus / Minus
Query: 946 gcgacgagggaagctaagtcgctatggaccaccaaatttgggttctcaaggctgggtaga 1005
||||||||||||||||| ||||||||||||||| || | |||||||||||||||||||||
Sbjct: 455 gcgacgagggaagctaaatcgctatggaccacccaactcgggttctcaaggctgggtaga 396
Query: 1006 gagaagataaacaactaccaaaaatacaacaacataatggcatttaagggaacattgttt 1065
||||||||||||||||||| | |||| ||||||||||||||||||||||||| ||||||
Sbjct: 395 gagaagataaacaactaccctatatacgacaacataatggcatttaagggaaccttgttt 336
Query: 1066 ctccagaagcctattcctcaactacaaaaaatacaacaacatagtagcatttcaaggaac 1125
|||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 335 ctcccgaagcctattcctcaactaccaaaaatacaactacatagtagcatttcaaggaac 276
Query: 1126 attctttctctagaagcatattcctgtgctgaaatgagggcctaatta 1173
| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aatcattctctagaagcatattcctgtgctgaaatgagggcctaatta 228
>gnl|LJGI|TC75647 weakly similar to UniRef100_A7QJA9 Cluster: Chromosome chr8
scaffold_106, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_106, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (82%)
Length = 1617
Score = 52.0 bits (26), Expect = 8e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 316 tttggtcctcggacagtaatgatttgtgatcagtgtgagaaggaataccatgtcgagtgc 375
|||||||| || ||| |||| || |||||||||||||| |||||||| || |||| ||
Sbjct: 544 tttggtccacgcacaataatcatatgtgatcagtgtgaaaaggaatatcacgtcggctgt 603
Query: 376 ttgaaggatcataa 389
|||| |||||||||
Sbjct: 604 ttgagggatcataa 617