Miyakogusa Predicted Gene
- Lj3g3v3026760.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3026760.4 CUFF.45209.4
(3351 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69477 similar to UniRef100_A7PQN2 Cluster: Chromosome... 898 0.0
gnl|LJGI|TC69008 587 e-166
gnl|LJGI|DC595894 weakly similar to UniRef100_A7PQN2 Cluster: Ch... 496 e-139
gnl|LJGI|BW594476 similar to UniRef100_A7PQN2 Cluster: Chromosom... 387 e-106
>gnl|LJGI|TC69477 similar to UniRef100_A7PQN2 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 801
Score = 898 bits (453), Expect = 0.0
Identities = 456/457 (99%)
Strand = Plus / Plus
Query: 2895 tcacattaatgggtatgttgatcgtgttgccaattgtaaatgggaagtaaaagaacttgg 2954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcacattaatgggtatgttgatcgtgttgccaattgtaaatgggaagtaaaagaacttgg 60
Query: 2955 gatggagcataatgggtacgttgatttgttgctgggggagtttaagcactataaaacacg 3014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatggagcataatgggtacgttgatttgttgctgggggagtttaagcactataaaacacg 120
Query: 3015 acttgcacatggtggaattcgtaaggagattcaagacttactgttggactatgggcttga 3074
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 acttgcacatggtggaattcgtacggagattcaagacttactgttggactatgggcttga 180
Query: 3075 aattgtggcggaagctcttgttgaaggactttcacgggtgaagagatgtagtgatgaagg 3134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattgtggcggaagctcttgttgaaggactttcacgggtgaagagatgtagtgatgaagg 240
Query: 3135 acgagctctcatgtcattggatctgcaggttttgatcaatgggctacatcattttgtgtc 3194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgagctctcatgtcattggatctgcaggttttgatcaatgggctacatcattttgtgtc 300
Query: 3195 gttgaatgtgaagcccaagttgcaaatggttgaaactttcattaaggcttattaccttcc 3254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttgaatgtgaagcccaagttgcaaatggttgaaactttcattaaggcttattaccttcc 360
Query: 3255 cgagacggaatatgtacactgggcacgagcacacccggaatacagtaaaagccaggttgt 3314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgagacggaatatgtacactgggcacgagcacacccggaatacagtaaaagccaggttgt 420
Query: 3315 tggactgatcaaccttgttgctactatgaaaggatgg 3351
|||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggactgatcaaccttgttgctactatgaaaggatgg 457
>gnl|LJGI|TC69008
Length = 772
Score = 587 bits (296), Expect = e-166
Identities = 296/296 (100%)
Strand = Plus / Plus
Query: 104 tcgatagttctagggttttcttcttgcttcctttcttcttgctctcacagggaggagcaa 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tcgatagttctagggttttcttcttgcttcctttcttcttgctctcacagggaggagcaa 536
Query: 164 tggatttgtctaaagtcggtgaaaagatcttgagctccgtcaggtccgccagatcgctcg 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tggatttgtctaaagtcggtgaaaagatcttgagctccgtcaggtccgccagatcgctcg 596
Query: 224 gcttgctccctcccgcttccgatcggcctgaggttccagctcgagccgctgctgcagctg 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gcttgctccctcccgcttccgatcggcctgaggttccagctcgagccgctgctgcagctg 656
Query: 284 ctgttgctcgtgctcttgcaggattacctcctcatcagaggtatagtctttcatcaagtt 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ctgttgctcgtgctcttgcaggattacctcctcatcagaggtatagtctttcatcaagtt 716
Query: 344 cagaagaactgagttcaatatatggaagcagacctggccaagtagtggaggaactg 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 cagaagaactgagttcaatatatggaagcagacctggccaagtagtggaggaactg 772
Score = 143 bits (72), Expect = 8e-33
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 atgcagccgaacttgtttccatttggaagcgtgctggggaatccgttcattttcgatgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atgcagccgaacttgtttccatttggaagcgtgctggggaatccgttcattttcgatgcc 433
Query: 61 gatttgagtgac 72
||||||||||||
Sbjct: 434 gatttgagtgac 445
>gnl|LJGI|DC595894 weakly similar to UniRef100_A7PQN2 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 283
Score = 496 bits (250), Expect = e-139
Identities = 273/283 (96%)
Strand = Plus / Plus
Query: 2426 tctttaagggaatatgccagttgtttgaaannnnnnnctattctatatatgaaacatttg 2485
|||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tctttaagggaatatgccagttgtttgaaatttttttctattctatatatgaaacatttg 60
Query: 2486 gtcagcagaacactaattcaagtggaaaaagctcaactaactctcttaattatcgcttga 2545
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 gtcagcagaacactaattcaagtggaaaaagctcaactaactctcctaattatcgcttga 120
Query: 2546 ggacagccttatctagaataaatcaagattgtgaagagtggattaaacctcagtcgtctt 2605
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 ggacagccttatctagaataaatcaagattgtgaagagtggattaaacctcattcgtctt 180
Query: 2606 caccatcatctttaagttcttcatttgtacatgcagagttcacgcctatgaaccctccca 2665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caccatcatctttaagttcttcatttgtacatgcagagttcacgcctatgaaccctccca 240
Query: 2666 atagtaatgttggtcactcatcagggacttctttgggtctcaa 2708
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241 atagtaatgttggtgactcatcagggacttctttgggtctcaa 283
>gnl|LJGI|BW594476 similar to UniRef100_A7PQN2 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 496
Score = 387 bits (195), Expect = e-106
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 1634 gtgtgtcagtattgctttcttctgctgcatcttgttctgcaagcattcatcaattcttga 1693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtgtgtcagtattgctttcttctgctgcatcttgttctgcaagcattcatcaattcttga 70
Query: 1694 aaaattatgaagatctcagtgtattcattttgactggtgaagccttctgtggaattgaag 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aaaattatgaagatctcagtgtattcattttgactggtgaagccttctgtggaattgaag 130
Query: 1754 cagttgaattcaggcagaagttgaaggttgtttgtgaaaactatttcatagcttttcatc 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cagttgaattcaggcagaagttgaaggttgtttgtgaaaactatttcatagcttttcatc 190
Query: 1814 gacaaaatgtacatg 1828
|||||||||||||||
Sbjct: 191 gacaaaatgtacatg 205