Miyakogusa Predicted Gene

Lj3g3v3016610.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3016610.1 Non Chatacterized Hit- tr|K3Y785|K3Y785_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010076,38.97,9e-19,AMINO ACID TRANSPORTER,NULL; Aa_trans,Amino
acid transporter, transmembrane,CUFF.45157.1
         (453 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS335111 similar to UniRef100_A7PQK0 Cluster: Chromosom...   422   e-118

>gnl|LJGI|FS335111 similar to UniRef100_A7PQK0 Cluster: Chromosome chr6 scaffold_25,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_25, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (40%)
          Length = 786

 Score =  422 bits (213), Expect = e-118
 Identities = 389/447 (87%), Gaps = 3/447 (0%)
 Strand = Plus / Plus

                                                                       
Query: 10  ctgcttccaacctcaacagtagtaaatgaaaattcagagaagccagatgcttcgcaacaa 69
           |||||||||| |||||||| |||| ||| | |||||||||||| | |||||||   | ||
Sbjct: 56  ctgcttccaatctcaacagcagtacatgcagattcagagaagcaaaatgcttctttagaa 115

                                                                       
Query: 70  attcaacaccaaaaagat---gttgatgcaggagctctctttgtgctcaaatcaaaaggt 126
           |||||||| ||||| |||   ||||||||||| ||||||||||| |||||||||||||| 
Sbjct: 116 attcaacaacaaaaggataatgttgatgcaggcgctctctttgtcctcaaatcaaaaggg 175

                                                                       
Query: 127 tcatggatacactctggttaccatttgacaacatcaatagtggctccaactctgttgagt 186
           |||||| | || |||| |||||| || ||||||||||| ||||||||| |||| ||||||
Sbjct: 176 tcatgggtgcattctgcttaccacttaacaacatcaattgtggctccacctctattgagt 235

                                                                       
Query: 187 cttccttatgcattcaccttccttggatggacagctggtatcttaagcttagtcattgga 246
           |||||||||||||||||||| ||||||||||| ||||| |||||  ||||||| ||||||
Sbjct: 236 cttccttatgcattcacctttcttggatggacggctgggatcttgtgcttagttattgga 295

                                                                       
Query: 247 gctcttgtcactttctactcttacaatttaatatcacttgtccttgaacaccacgctaag 306
           ||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||| ||||||
Sbjct: 296 gctcttgtcaccttctactcctacaatttaatatctcttgttcttgagcaccatgctaag 355

                                                                       
Query: 307 ttgggtaatcgtcagcttcgattcagagacatggctcgcgtcattttaggtccacgatgg 366
           ||||||||||||||||| |||| ||||||||||||||  |  ||| |||||||| |||||
Sbjct: 356 ttgggtaatcgtcagctccgatacagagacatggctcatgatattctaggtccaagatgg 415

                                                                       
Query: 367 ggtcgttactttgtggggccaattcagttcgcagtctgttatggtgctgtagtggcttgt 426
           ||||||||  |||||||||| ||||||| | ||||||| ||||||| ||||||||| | |
Sbjct: 416 ggtcgttatgttgtggggccgattcagtgcacagtctgctatggtgttgtagtggcgtct 475

                                      
Query: 427 actcttttgggaggacaatgcatgaag 453
           |||||||| ||||||||||||||||||
Sbjct: 476 actcttttaggaggacaatgcatgaag 502