Miyakogusa Predicted Gene
- Lj3g3v3006210.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3006210.1 Non Chatacterized Hit- tr|I0YXM6|I0YXM6_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,31.68,7e-19,SODIUM-DEPENDENT VITAMIN C TRANSPORTER,NULL;
XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY
MEMBER,Xant,NODE_54968_length_876_cov_49.124428.path2.1
(474 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS361457 similar to UniRef100_A7PQI8 Cluster: Chromosom... 817 0.0
gnl|LJGI|TC66192 similar to UniRef100_A7PQI8 Cluster: Chromosome... 226 1e-58
gnl|LJGI|TC76930 similar to UniRef100_A7PQI8 Cluster: Chromosome... 202 1e-51
gnl|LJGI|DC599652 similar to UniRef100_A7PQI8 Cluster: Chromosom... 176 8e-44
>gnl|LJGI|FS361457 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 699
Score = 817 bits (412), Expect = 0.0
Identities = 412/412 (100%)
Strand = Plus / Minus
Query: 63 acgctacagtgaggctggaagctctcgcaatatcatcatagttgggttatcattgttctt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 acgctacagtgaggctggaagctctcgcaatatcatcatagttgggttatcattgttctt 640
Query: 123 ctctctttcggtgcctgcttactttcaacaatacgacatctctccaaattccaacttgtc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ctctctttcggtgcctgcttactttcaacaatacgacatctctccaaattccaacttgtc 580
Query: 183 tgtgcctagttactttcagccctacattgtagcttctcacgggcctttccactgcaaata 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tgtgcctagttactttcagccctacattgtagcttctcacgggcctttccactgcaaata 520
Query: 243 tggagggttgaactatgtcttgaacacgcttctttcactacacatggtgatagcgtttct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tggagggttgaactatgtcttgaacacgcttctttcactacacatggtgatagcgtttct 460
Query: 303 tgttgcttttatcctggataatactgtacctggcggtcggcaggaacgtggggtatacgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tgttgcttttatcctggataatactgtacctggcggtcggcaggaacgtggggtatacgt 400
Query: 363 ttggtccgaatctgaggttgctaaaagagagcctgctgttgccagtgactacgaattgcc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttggtccgaatctgaggttgctaaaagagagcctgctgttgccagtgactacgaattgcc 340
Query: 423 cttaggagttggtcggattttcagatgggtgaagtgggttggcctctgaact 474
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cttaggagttggtcggattttcagatgggtgaagtgggttggcctctgaact 288
>gnl|LJGI|TC66192 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 684
Score = 226 bits (114), Expect = 1e-58
Identities = 234/274 (85%)
Strand = Plus / Plus
Query: 199 cagccctacattgtagcttctcacgggcctttccactgcaaatatggagggttgaactat 258
||||| |||||||| |||||||| |||||||||| | ||||||| |||||||| || |||
Sbjct: 2 cagccttacattgtggcttctcatgggcctttccgcagcaaatacggagggttaaattat 61
Query: 259 gtcttgaacacgcttctttcactacacatggtgatagcgtttcttgttgcttttatcctg 318
|| | |||||| || | ||||||||||||||||| || |||||||| ||| ||||| ||
Sbjct: 62 ttcctaaacacgattttctcactacacatggtgatcgcttttcttgtcgctgttatcttg 121
Query: 319 gataatactgtacctggcggtcggcaggaacgtggggtatacgtttggtccgaatctgag 378
||||||||||||||||| || |||||||||||||||||| |||||||| ||| ||||
Sbjct: 122 gataatactgtacctggtagtaagcaggaacgtggggtatatgtttggtcagaacctgat 181
Query: 379 gttgctaaaagagagcctgctgttgccagtgactacgaattgcccttaggagttggtcgg 438
||||||| ||| |||||||||||||| | |||||| || |||||||| | |||||| |
Sbjct: 182 gttgctagaagggagcctgctgttgcgaatgactatgagttgcccttgagggttggtaag 241
Query: 439 attttcagatgggtgaagtgggttggcctctgaa 472
|||||| |||||||||||||||||||||| ||||
Sbjct: 242 attttccgatgggtgaagtgggttggcctgtgaa 275
>gnl|LJGI|TC76930 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 431
Score = 202 bits (102), Expect = 1e-51
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 373 tctgaggttgctaaaagagagcctgctgttgccagtgactacgaattgcccttaggagtt 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tctgaggttgctaaaagagagcctgctgttgccagtgactacgaattgcccttaggagtt 190
Query: 433 ggtcggattttcagatgggtgaagtgggttggcctctgaact 474
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ggtcggattttcagatgggtgaagtgggttggcctctgaact 232
>gnl|LJGI|DC599652 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 538
Score = 176 bits (89), Expect = 8e-44
Identities = 101/105 (96%)
Strand = Plus / Minus
Query: 364 tggtccgaatctgaggttgctaaaagagagcctgctgttgccagtgactacgaattgccc 423
|||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 201 tggtccgaatctgaggttactaaaagagagcctgctgttgccagtgtctatgaattgccc 142
Query: 424 ttaggagttggtcggattttcagatgggtgaagtgggttggcctc 468
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 141 ttaggagttggccggattttcagatgggtgaagtgggttggcctc 97
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 249 gttgaactatgtcttgaacacgcttctttcactacacatggt 290
||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 239 gttgaactatgtcttgaacacgcttttttcactacacatggt 198