Miyakogusa Predicted Gene
- Lj3g3v3006200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3006200.1 Non Chatacterized Hit- tr|I1LKV8|I1LKV8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,92,0,Xan_ur_permease,Xanthine/uracil/vitamin C permease;
seg,NULL; SODIUM-DEPENDENT VITAMIN C
TRANSPORTER,NODE_56063_length_1149_cov_52.087902.path2.1
(1128 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS334472 similar to UniRef100_A7PQI8 Cluster: Chromosom... 749 0.0
gnl|LJGI|DC595680 similar to UniRef100_A7PQI8 Cluster: Chromosom... 250 2e-65
gnl|LJGI|TC81356 similar to UniRef100_A7PQI8 Cluster: Chromosome... 170 1e-41
gnl|LJGI|TC68108 similar to UniRef100_A7PQI8 Cluster: Chromosome... 90 4e-17
>gnl|LJGI|FS334472 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 692
Score = 749 bits (378), Expect = 0.0
Identities = 609/686 (88%)
Strand = Plus / Plus
Query: 380 ctggacttatgtcgcttttagtaagattgatcaatccagttgttgtagccccgactattg 439
|||||||||||||||| |||||||| ||||||||||| || |||||| |||| |||||||
Sbjct: 7 ctggacttatgtcgctgttagtaaggttgatcaatcccgtggttgtatccccaactattg 66
Query: 440 ctgcagttggactttcgttttacagttatggttttccattagtgggtacatgtattgaga 499
||||||| |||||||| ||||||||||| ||||||||| |||||||||||||| ||||||
Sbjct: 67 ctgcagtcggactttcattttacagttacggttttccactagtgggtacatgtcttgaga 126
Query: 500 tcggtgcagtacagatattagtggtcattgttttttcactttatcttcgcaagatatcgg 559
|||| ||| ||||||||||||||| ||| ||||||| ||||||||||| |||||||| |
Sbjct: 127 tcggagcaatacagatattagtggctatttttttttctctttatcttcgtaagatatctg 186
Query: 560 ttcttggacatcgcatatttctagtatatgcggttcctttgggtctagcaattacatggg 619
|||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||||
Sbjct: 187 ttcttggacaccgcatatttctaatatatgcagttcctttgggtctagctattacatggg 246
Query: 620 catttgctttcttgctgactgaagcaggaatatacagtcacaaaggatgtgatataaatg 679
|| || |||||||| |||||||| ||| |||| ||||||| ||||| || |
Sbjct: 247 cagcagccttcttgctcactgaagctggagcctacaactacaaagggtgtgacatcagca 306
Query: 680 tacctgcatccaatatggtttcagagcactgcagaaagcatttttcaaggatgatccatt 739
||||||| || |||||||||||||| |||||||||||||| | |||||||||| ||||
Sbjct: 307 tacctgcctcaaatatggtttcagaacactgcagaaagcacatatcaaggatgaggcatt 366
Query: 740 gtcgggtggatactagtcaggcattgaaatcctctccatggtttagatttccatatccac 799
|||| || ||||| || ||||||||||| || ||||||||||||||||| |||||||
Sbjct: 367 gtcgagttgatacatctcgtgcattgaaatcatccccatggtttagatttccttatccac 426
Query: 800 tacaatggggtgcccctctcttcaactggaaaatgtctcttgtaatgtgtgtggtttcct 859
||||||||||| | ||| |||| ||||||||||| ||||||| ||||||||||||||||
Sbjct: 427 tacaatggggtactcctgccttccactggaaaatggctcttgtgatgtgtgtggtttcct 486
Query: 860 taatctcatctgtggattcggttgggtcataccatgcatcttcattattggtagcatcca 919
| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 487 tgatctcatctgtggattcggttggctcatatcatgcatcttcattattggtagcatcca 546
Query: 920 gacctccaactccaggagttcttagtcgaggaattggtttggaaggtctttctagtgtct 979
||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 547 gacctccaactcctggagttcttagtcgaggaattggtttagaaggtctttgtagtgtct 606
Query: 980 tggctggtctctggggaactggaactgggtctacaactttaactgaaaatgttcacacaa 1039
|||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||
Sbjct: 607 tggctggtctctggggtactggtactgggtcttcaactttgactgaaaatgttcacacaa 666
Query: 1040 ttgcggtgactaaaatgggaagccgc 1065
|||| |||||||||||||||||||||
Sbjct: 667 ttgctgtgactaaaatgggaagccgc 692
>gnl|LJGI|DC595680 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 441
Score = 250 bits (126), Expect = 2e-65
Identities = 159/170 (93%)
Strand = Plus / Plus
Query: 879 ggttgggtcataccatgcatcttcattattggtagcatccagacctccaactccaggagt 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ggttgggtcataccatgcatcttcattattggtagcatccagacctccaactccaggagt 331
Query: 939 tcttagtcgaggaattggtttggaaggtctttctagtgtcttggctggtctctggggaac 998
||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 332 tcttagttgaggaattggttgggaaggtctttctagtgtcttggccggtctctggggaac 391
Query: 999 tggaactgggtctacaactttaactgaaaatgttcacacaattgcggtga 1048
|||| ||| ||||||||||| ||| | ||| |||| ||||||||| ||||
Sbjct: 392 tggagctgtgtctacaacttcaacgggaaacgttcgcacaattgctgtga 441
>gnl|LJGI|TC81356 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 813
Score = 170 bits (86), Expect = 1e-41
Identities = 122/134 (91%)
Strand = Plus / Plus
Query: 1 atgaagtacgagctcagagattcacctggtttagttcccattggtgtgtatggtatgcag 60
|||||||| ||||||||||||||||||||||||||||| |||||| | || || || |||
Sbjct: 630 atgaagtatgagctcagagattcacctggtttagttcctattggtatatacggcattcag 689
Query: 61 cattacgtttcgatgttaggttcgttgattctcattccacttgttattgttcctgccatg 120
||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 690 cattatgtttcgatattaggttcgttgattctcattccgcttgtcattgttcctgccatg 749
Query: 121 ggaggaactcatga 134
||||||| ||||||
Sbjct: 750 ggaggaaatcatga 763
>gnl|LJGI|TC68108 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 717
Score = 89.7 bits (45), Expect = 4e-17
Identities = 54/56 (96%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 1 atgaagtacgagctcagagatt-cacctggtttagttcccattggtgtgtatggta 55
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 662 atgaagtacgagctcagagatttcacctgntttagttcccattggtgtgtatggta 717