Miyakogusa Predicted Gene

Lj3g3v2995970.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2995970.1 tr|G7JKW4|G7JKW4_MEDTR DNA polymerase OS=Medicago
truncatula GN=MTR_4g054980 PE=3 SV=1,84.29,0,seg,NULL; DNA/RNA
polymerases,NULL; Ribonuclease H-like,Ribonuclease H-like domain; DNA
polymerase t,CUFF.45134.1
         (6630 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CN825787 similar to UniRef100_A7PQF7 Cluster: DNA polym...   735   0.0  

>gnl|LJGI|CN825787 similar to UniRef100_A7PQF7 Cluster: DNA polymerase; n=1; Vitis
            vinifera|Rep: DNA polymerase - Vitis vinifera (Grape),
            partial (5%)
          Length = 372

 Score =  735 bits (371), Expect = 0.0
 Identities = 371/371 (100%)
 Strand = Plus / Plus

                                                                        
Query: 6238 cattctttcatcttatccaatgtcatatgcagctattgtaatgactgcagagacatggat 6297
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    cattctttcatcttatccaatgtcatatgcagctattgtaatgactgcagagacatggat 61

                                                                        
Query: 6298 ttgtgccgtgactcagctttaatgacggaggagtggcgttgtgccgtacctcagtgtggc 6357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   ttgtgccgtgactcagctttaatgacggaggagtggcgttgtgccgtacctcagtgtggc 121

                                                                        
Query: 6358 caaccttatgatcgtgaggtgatggagaatgctctccttcaaatcgtacgacaaagggag 6417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  caaccttatgatcgtgaggtgatggagaatgctctccttcaaatcgtacgacaaagggag 181

                                                                        
Query: 6418 cgactataccacctgcaagatttggtttgtctcaggtgcagccaggtgaaagctgcacat 6477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  cgactataccacctgcaagatttggtttgtctcaggtgcagccaggtgaaagctgcacat 241

                                                                        
Query: 6478 ttggctgagcaatgtgcatgtgctggctcatttaggtgcaaggaagatgtaagtgaattt 6537
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  ttggctgagcaatgtgcatgtgctggctcatttaggtgcaaggaagatgtaagtgaattt 301

                                                                        
Query: 6538 cgcacaaagatgcaggttttcttgagtatagcttctcgtcaaaagttccaacttctccaa 6597
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  cgcacaaagatgcaggttttcttgagtatagcttctcgtcaaaagttccaacttctccaa 361

                       
Query: 6598 gaatgtacctc 6608
            |||||||||||
Sbjct: 362  gaatgtacctc 372