Miyakogusa Predicted Gene
- Lj3g3v2995780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2995780.1 Non Chatacterized Hit- tr|I3SDH3|I3SDH3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,72.47,0,MALE
STERILITY PROTEIN 2-RELATED,NULL; MALE STERILITY PROTEIN
2-RELATED,Fatty acyl-CoA reductase; NA,CUFF.45113.1
(864 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB827884 weakly similar to UniRef100_A7R0D9 Cluster: Ch... 890 0.0
gnl|LJGI|TC70603 weakly similar to UniRef100_A7R0D9 Cluster: Chr... 650 0.0
gnl|LJGI|TC68588 weakly similar to UniRef100_A7R0D9 Cluster: Chr... 400 e-111
gnl|LJGI|DC594467 weakly similar to UniRef100_Q5QIV3 Cluster: Ac... 268 5e-71
gnl|LJGI|BP062765 similar to UniRef100_A7NZ22 Cluster: Chromosom... 167 1e-40
gnl|LJGI|TC63658 similar to UniRef100_A7R0D9 Cluster: Chromosome... 109 3e-23
gnl|LJGI|TC80071 similar to UniRef100_A7R0D9 Cluster: Chromosome... 72 6e-12
>gnl|LJGI|CB827884 weakly similar to UniRef100_A7R0D9 Cluster: Chromosome chr6
scaffold_305, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_305, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (36%)
Length = 541
Score = 890 bits (449), Expect = 0.0
Identities = 515/537 (95%)
Strand = Plus / Plus
Query: 207 cccaggttggattgaaggtgtaagaaccattgacaattattttgttgcttatggtaaagg 266
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 cccaggttggattgaagatgtaagaaccattgacaattattttgttgcttttggtaaagg 60
Query: 267 aaagttaaaatgcttccttggggaccttgatgtagtttgtgacgtgataccagctgacat 326
|| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 61 aatgttaaaatgcttccttggggaccttaatgtagtttgtgacgcgataccagctgacat 120
Query: 327 ggtggtgaatgcaatactagtagccatggtggctcatgcaaatcatccttgtgatatcat 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtggtgaatgcaatactagtagccatggtggctcatgcaaatcatccttgtgatatcat 180
Query: 387 atatcatgtgggttcctctgtttcaaatccagtcacatacctcaagtttgaagactacat 446
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 181 atatcatgtgggttcctctgtttcaaatccagtcacataccataatcttgaagactacac 240
Query: 447 ctacagatattttactgcaaaaccatacataaacacagatggaaagcgtgtcaagattgg 506
|| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 241 cttcagatattttactgcaaaaccatacataaacacagatggaaagcctatcaagattgg 300
Query: 507 caaacttacaatattgcacaacatggatagctttcacagatacatgttcattcgttacgt 566
|||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 caaagttacaatactgcacaacatggatagctttcatagatacatgttcattcgttacgt 360
Query: 567 gcttccagcaaaggggctagagctggttaatgcagcattttgccaatattttgagcacaa 626
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 361 gcttccagcaaaggggctagagctggttaatgcagcattttgccattattttgagcaaaa 420
Query: 627 atgtcgtgacataaacaggaagatcaagatcgtaatgcagttggttgaagtcttcaagcc 686
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 421 acgtcgtgacataaacaggaagatcaagattgtaatgcagttggttgaagtcttcaagcc 480
Query: 687 ttactgtttcttcaatggcgtgtttgataatatgaacacagaaaagttgctgatagc 743
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 481 ttactgtttcttcaatggcgtatttgataatatgaacacagaaaagttgcagatagc 537
>gnl|LJGI|TC70603 weakly similar to UniRef100_A7R0D9 Cluster: Chromosome chr6
scaffold_305, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_305, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (38%)
Length = 856
Score = 650 bits (328), Expect = 0.0
Identities = 367/380 (96%)
Strand = Plus / Plus
Query: 485 atggaaagcgtgtcaagattggcaaacttacaatattgcacaacatggatagctttcaca 544
||||||||| | |||||||||||||| |||||||| |||||||||||||||||||||| |
Sbjct: 217 atggaaagcctatcaagattggcaaagttacaatactgcacaacatggatagctttcata 276
Query: 545 gatacatgttcattcgttacgtgcttccagcaaaggggctagagctggttaatgcagcat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gatacatgttcattcgttacgtgcttccagcaaaggggctagagctggttaatgcagcat 336
Query: 605 tttgccaatattttgagcacaaatgtcgtgacataaacaggaagatcaagatcgtaatgc 664
||||||| ||||||||||| ||| |||||||||||||||||||||||||||| |||||||
Sbjct: 337 tttgccattattttgagcaaaaacgtcgtgacataaacaggaagatcaagattgtaatgc 396
Query: 665 agttggttgaagtcttcaagccttactgtttcttcaatggcgtgtttgataatatgaaca 724
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 397 agttggttgaagtcttcaagccttactgtttcttcaatggcgtatttgataatatgaaca 456
Query: 725 cagaaaagttgctgatagcggcaaaacaaggtggggtagaaatggatttgttttactttg 784
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cagaaaagttgcagatagcagcaaaacaaggtggggtagaaatggatttgttttactttg 516
Query: 785 acccaaaaatgattgattgggaagactacttcatgaatatccatttccctgctctcgtca 844
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 517 acccaaaaatgattgattgggaagactacatcatgaatatccatttccctgctctcgtca 576
Query: 845 aatatgccttcaagtgattg 864
||||||||||||||||||||
Sbjct: 577 aatatgccttcaagtgattg 596
Score = 236 bits (119), Expect = 2e-61
Identities = 128/131 (97%)
Strand = Plus / Plus
Query: 263 aaggaaagttaaaatgcttccttggggaccttgatgtagtttgtgacgtgataccagctg 322
|||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 86 aaggaatgttaaaatgcttccttggggaccttaatgtagtttgtgacgcgataccagctg 145
Query: 323 acatggtggtgaatgcaatactagtagccatggtggctcatgcaaatcatccttgtgata 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 acatggtggtgaatgcaatactagtagccatggtggctcatgcaaatcatccttgtgata 205
Query: 383 tcatatatcat 393
|||||||||||
Sbjct: 206 tcatatatcat 216
Score = 149 bits (75), Expect = 3e-35
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 144 ggaaaacatgtctgttgttattgtgcggcctacaatcgttctcagcacttacagagaacc 203
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ggaaaacatgtctgttgttattgtgcggcctacaatcgttagcagcacttacagagaacc 61
Query: 204 tttcccaggttggattgaaggtgtaag 230
|||||||||||||||||||| ||||||
Sbjct: 62 tttcccaggttggattgaagatgtaag 88
>gnl|LJGI|TC68588 weakly similar to UniRef100_A7R0D9 Cluster: Chromosome chr6
scaffold_305, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_305, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (45%)
Length = 795
Score = 400 bits (202), Expect = e-111
Identities = 534/644 (82%), Gaps = 3/644 (0%)
Strand = Plus / Plus
Query: 187 agcacttacagagaacctttcccaggttggattgaaggtgtaagaaccattgacaattat 246
||||||||||||||||| ||||| || ||| ||||||||||||||||||| |||| ||
Sbjct: 12 agcacttacagagaaccattccctggctgggttgaaggtgtaagaaccatagacagttta 71
Query: 247 tttgttgcttatggtaaaggaaagttaaaatgcttccttggggaccttgatgtagtttgt 306
|||||||||||||||||||||| || | ||||||||||| |||| || | | |||| |
Sbjct: 72 attgttgcttatggtaaaggaaaattgacatgcttccttgcggacattaaggcggttttt 131
Query: 307 gacgtgataccagctgacatggtggtgaatgcaatactagtagccatggtggctcatgca 366
|| |||||||||||||||||||||||||||||||||||||| || ||||||| | |||||
Sbjct: 132 gatgtgataccagctgacatggtggtgaatgcaatactagtggctatggtgggtaatgca 191
Query: 367 aatca---tccttgtgatatcatatatcatgtgggttcctctgtttcaaatccagtcaca 423
|||| || |||||||| ||||| ||||| |||||||||||| |||||||||| | |
Sbjct: 192 gatcagcgcccctgtgatatgatataccatgttggttcctctgttgcaaatccagtgaga 251
Query: 424 tacctcaagtttgaagactacatctacagatattttactgcaaaaccatacataaacaca 483
||||| || |||||||||||| || |||||||||| |||||||||| | | |||
Sbjct: 252 taccttaatcttgaagactacaacttcagatatttttctgcaaaaccgtgtaaggacaag 311
Query: 484 gatggaaagcgtgtcaagattggcaaacttacaatattgcacaacatggatagctttcac 543
|| ||||||| ||||||| || ||| | | ||||||||| |||||||| ||||||||
Sbjct: 312 gaaggaaagcttgtcaaggttagcagagtcacaatattggacaacatgcctagctttcgg 371
Query: 544 agatacatgttcattcgttacgtgcttccagcaaaggggctagagctggttaatgcagca 603
||||| |||||||| || ||| |||||||| ||||||||||||||| || || ||||
Sbjct: 372 agatatatgttcatccgctacttgcttccactaaaggggctagagctagtcaacacagct 431
Query: 604 ttttgccaatattttgagcacaaatgtcgtgacataaacaggaagatcaagatcgtaatg 663
|| |||||||||||| || | | || |||||| ||||||||||| | || || |||
Sbjct: 432 ttctgccaatattttcagggaatgtatcttgacattcacaggaagatccacattgtgatg 491
Query: 664 cagttggttgaagtcttcaagccttactgtttcttcaatggcgtgtttgataatatgaac 723
| ||||||||| | | ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 492 cggttggttgacctttacaagccttacttgttcttcaatggcgtatttgataacatgaat 551
Query: 724 acagaaaagttgctgatagcggcaaaacaaggtggggtagaaatggatttgttttacttt 783
||||||||||||| ||||| ||||||||||| | | ||| |||||| |||| ||||||
Sbjct: 552 acagaaaagttgcaaatagcagcaaaacaaggggaagcagagatggatgtgttctacttt 611
Query: 784 gacccaaaaatgattgattgggaagactacttcatgaatatcca 827
|| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 612 gatccaaaaatgattgattgggaggactacttcatgaatatcca 655
>gnl|LJGI|DC594467 weakly similar to UniRef100_Q5QIV3 Cluster: Acyl CoA reductase;
n=1; Hevea brasiliensis|Rep: Acyl CoA reductase - Hevea
brasiliensis (Para rubber tree), partial (26%)
Length = 365
Score = 268 bits (135), Expect = 5e-71
Identities = 168/179 (93%)
Strand = Plus / Plus
Query: 1 atgcttcaagaagagggagcctccgaaaaggaaattaaaatggccatgagggacttaggt 60
||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||| |||
Sbjct: 187 atgcttcaagaagagggagcctcagaaaatgaaattaaaatggctatgaaggacttgggt 246
Query: 61 atggaaagagcaactcaatttggatggccaaacacgtatgttttcactaaggcaatggga 120
||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 247 atgaaaagagcaactcaatttggatggccacacacgtatgtttttacaaaggcaatggga 306
Query: 121 gaaatgcttgttggaactgtgaaggaaaacatgtctgttgttattgtgcggcctacaat 179
||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaaatgcttgtaggaactctgaaggaaaacatgtctgttgttattgtgcggcctacaat 365
>gnl|LJGI|BP062765 similar to UniRef100_A7NZ22 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 357
Score = 167 bits (84), Expect = 1e-40
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 709 tttgataatatgaacacagaaaagttgctgatagcggcaaaacaaggtggggtagaaatg 768
|||||| ||||| || | |||||||||| |||||| || |||| ||||||||||||||||
Sbjct: 320 tttgatgatatggaccccgaaaagttgccgatagcagccaaaccaggtggggtagaaatg 261
Query: 769 gatttgttttactttgacccaaaaatgattgattgggaagactacttcatgaatatccat 828
|||||||||||||||||||| ||||||||||||||||||||||| || || |||||| |
Sbjct: 260 gatttgttttactttgacccccaaatgattgattgggaagactacatcctgtatatccct 201
Query: 829 ttccctgctctcgtcaaatatgccttcaagtgattg 864
||||||||||||||| |||| ||| || ||||||||
Sbjct: 200 ttccctgctctcgtccaataagccctccagtgattg 165
>gnl|LJGI|TC63658 similar to UniRef100_A7R0D9 Cluster: Chromosome chr6 scaffold_305,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_305, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 848
Score = 109 bits (55), Expect = 3e-23
Identities = 105/121 (86%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 310 gtgataccagctgacatggtggtgaatgcaatactagtagccatggtggctcatgcaaat 369
|||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 83 gtgataccagctgatatggtggtgaatgcaatgctagtggccatggtagctcatgcaaat 142
Query: 370 catccttgtgat---atcatatatcatgtgggttcctctgtttcaaatccagtcacatac 426
|| || ||||| || |||||||||||||||||||||| ||||||||| ||||||
Sbjct: 143 caaccaagtgatcaggccacatatcatgtgggttcctctgttagaaatccagttacatac 202
Query: 427 c 427
|
Sbjct: 203 c 203
Score = 83.8 bits (42), Expect = 2e-15
Identities = 114/138 (82%)
Strand = Plus / Plus
Query: 684 gccttactgtttcttcaatggcgtgtttgataatatgaacacagaaaagttgctgatagc 743
|||||||| ||||||| |||||| |||||| ||||||||||||| ||||||| ||| ||
Sbjct: 460 gccttacttgttcttcagtggcgtatttgatgatatgaacacagagaagttgcggattgc 519
Query: 744 ggcaaaacaaggtggggtagaaatggatttgttttactttgacccaaaaatgattgattg 803
|||| |||||||| | ||| | || ||||||||||| ||||| ||| ||||||||
Sbjct: 520 agcaagacaaggtgagacagagaaagacttgttttacttcgaccccaaagatattgattg 579
Query: 804 ggaagactacttcatgaa 821
||| || |||||||||||
Sbjct: 580 ggatgattacttcatgaa 597
>gnl|LJGI|TC80071 similar to UniRef100_A7R0D9 Cluster: Chromosome chr6 scaffold_305,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_305, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 433
Score = 71.9 bits (36), Expect = 6e-12
Identities = 115/140 (82%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 683 agccttactgt-ttcttcaatggcgtgtttgataatatgaacacagaaaagttgctgata 741
||||||||||| ||||||| |||||| |||||| ||||||||||||| ||||||| |||
Sbjct: 16 agccttactgtgttcttcagtggcgtatttgatgatatgaacacagagaagttgcggatt 75
Query: 742 gcggcaaaacaaggtggggtagaaatggatttgttttactttgacccaaaaatgattgat 801
|| || | || ||||| | ||| | || ||||||||||| ||||| ||| ||||||
Sbjct: 76 gcagccagaccaggtgagacagagaaagacttgttttacttcgaccccaaagatattgat 135
Query: 802 tgggaagactacttcatgaa 821
||||| || |||||||||||
Sbjct: 136 tgggatgattacttcatgaa 155