Miyakogusa Predicted Gene
- Lj3g3v2995710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2995710.1 Non Chatacterized Hit- tr|B9SCR4|B9SCR4_RICCO
Vacuolar protein sorting-associated protein VPS4,
puta,91.24,0,seg,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; MIT domain,NULL; AAA,ATPase, AA,CUFF.45124.1
(1308 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67582 homologue to UniRef100_A7R0D5 Cluster: Chromoso... 2571 0.0
gnl|LJGI|TC57709 homologue to UniRef100_A7R0D5 Cluster: Chromoso... 1314 0.0
gnl|LJGI|TC58885 homologue to UniRef100_A7R0D5 Cluster: Chromoso... 1176 0.0
gnl|LJGI|TC59056 homologue to UniRef100_A7R0D5 Cluster: Chromoso... 482 e-135
>gnl|LJGI|TC67582 homologue to UniRef100_A7R0D5 Cluster: Chromosome chr6 scaffold_305,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_305, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1813
Score = 2571 bits (1297), Expect = 0.0
Identities = 1307/1309 (99%), Gaps = 1/1309 (0%)
Strand = Plus / Plus
Query: 1 atgtatagcaatttcaaggagcaagcgatcgagtacgtgaagcaagcggtacacgaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atgtatagcaatttcaaggagcaagcgatcgagtacgtgaagcaagcggtacacgaagac 266
Query: 61 aatgctgggaactacgcaaaagccttccctctctacatgaacgccttagagtacttcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatgctgggaactacgcaaaagccttccctctctacatgaacgccttagagtacttcaaa 326
Query: 121 acgcatctcaaatacgagaagaaccctaagatcaaagaagccatcacgcagcgtttcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acgcatctcaaatacgagaagaaccctaagatcaaagaagccatcacgcagcgtttcacc 386
Query: 181 gagtatctccgccgcgccgaggagatccgtgctgtgcttgatgatggtggccccggcccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gagtatctccgccgcgccgaggagatccgtgctgtgcttgatgatggtggccccggcccg 446
Query: 241 gcttccaacggggacgccgctgttgctgcgcggcccaagacgaagcctaaggacggcggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gcttccaacggggacgccgctgttgctgcgcggcccaagacgaagcctaaggacggcggt 506
Query: 301 gaaggcgacggcggggaggatcctgagcaggctaagcttcgtgctgggctgaattctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gaaggcgacggcggggaggatcctgagcaggctaagcttcgtgctgggctgaattctgct 566
Query: 361 atcatcagggagaagccgaatatcaagtggaatgatgttgcggggttggagagcgctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atcatcagggagaagccgaatatcaagtggaatgatgttgcggggttggagagcgctaaa 626
Query: 421 cagtccttgcaggaggcggttatcttgcctgtcaagttccctcagttcttcactggtaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cagtccttgcaggaggcggttatcttgcctgtcaagttccctcagttcttcactggtaaa 686
Query: 481 agacgaccttggagagcttttttgttgtacggaccacctggaacaggtaaatcatacttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agacgaccttggagagcttttttgttgtacggaccacctggaacaggtaaatcatacttg 746
Query: 541 gccaaggccgttgcaacagaagctgattctacatttttcagtgtttcttcatcagacctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gccaaggccgttgcaacagaagctgattctacatttttcagtgtttcttcatcagacctg 806
Query: 601 gt-ttcaaagtggatgggtgaaagtgaaaagctggtttcaaatctttttcaaatggcccg 659
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gtgttcaaagtggatgggtgaaagtgaaaagctggtttcaaatctttttcaaatggcccg 866
Query: 660 cgaaagtgcaccttctatcatatttgttgatgaaattgattctctctgtggtcagcgtgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 cgaaagtgcaccttctatcatatttgttgatgaaattgattctctctgtggtcagcgtgg 926
Query: 720 agagggcaatgagagtgaagcttcaagacgaattaaaactgaacttctagtgcagatgca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 agagggcaatgagagtgaagcttcaagacgaattaaaactgaacttctagtgcagatgca 986
Query: 780 gggtgtaggaaacaatgatcagaaagttcttgttcttgcagcaacaaatacaccttatgc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 gggtgtaggaaacaatgatcagaaagttcttgttcttgcagcaacaaatacaccttatgc 1046
Query: 840 tctcgatcaggcaataaggcggcgctttgataagcgtatatacattccactgccagatgt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 tctcgatcaggcaataaggcggcgctttgataagcgtatatacattccactgccagatgt 1106
Query: 900 gaaggctcgccaacacatgttcaaggtgcatttaggagatactccccataacttggctga 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 gaaggctcgccaacacatgttcaaggtgcatttaggagatactccccataacttggctga 1166
Query: 960 aagtgattttgaacacttggctcgcaagacagagggattttctggttcagatatatctgt 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 aagtgattttgaacacttggctcgcaagacagagggattttctggttcagatatatctgt 1226
Query: 1020 ctgtgtgaaagatgttttatttgaacctgttcgcaaaacccaagatgccatgtttttctt 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 ctgtgtgaaagatgttttatttgaacctgttcgcaaaacccaagatgccatgtttttctt 1286
Query: 1080 taagagtcctgagggtatgtggattccatgcggaccaaagcaacagggtgcaatacaaat 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 taagagtcctgagggtatgtggattccatgcggaccaaagcaacagggtgcaatacaaat 1346
Query: 1140 aacaatgcaagaccttgctacaaaaggtcttgcttctcagatccttccgccacctatatc 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 aacaatgcaagaccttgctacaaaaggtcttgcttctcagatccttccgccacctatatc 1406
Query: 1200 aagaaccgattttgacaaagtacttgccagacaaaggcctacagtaagcaagtctgacct 1259
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1407 aagaaccgattttgacaaagtacttgccagaccaaggcctacagtaagcaagtctgacct 1466
Query: 1260 tgaagtccacgagagattcacaaaggagtttggagaggaaggttaattg 1308
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1467 tgaagtccacgagagattcacaaaggagtttggagaggaaggttaattg 1515
>gnl|LJGI|TC57709 homologue to UniRef100_A7R0D5 Cluster: Chromosome chr6 scaffold_305,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_305, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1772
Score = 1314 bits (663), Expect = 0.0
Identities = 1145/1305 (87%), Gaps = 3/1305 (0%)
Strand = Plus / Plus
Query: 1 atgtatagcaatttcaaggagcaagcgatcgagtacgtgaagcaagcggtacacgaagac 60
|||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 220 atgtatagcaatttcaaggagcaagcaatagagtacgtgaagcaagcggtgcaggaagac 279
Query: 61 aatgctgggaactacgcaaaagccttccctctctacatgaacgccttagagtacttcaaa 120
|||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 280 aatgctggaaactacgccaaagccttccctctctacatgaacgctttggagtatttcaag 339
Query: 121 acgcatctcaaatacgagaagaaccctaagatcaaagaagccatcacgcagcgtttcacc 180
|| |||||||| ||||||||||| ||||||||||| ||||| || |||||| ||||||
Sbjct: 340 acccatctcaagtacgagaagaatcctaagatcaaggaagcgattacgcagaaattcacc 399
Query: 181 gagtatctccgccgcgccgaggagatccgtgctgtgcttgatgatggtggccccggcccg 240
|||||| | |||||||| ||||||||| | ||||| || ||||| || || |||||||||
Sbjct: 400 gagtatttgcgccgcgcggaggagatcagggctgttctagatgacggaggacccggcccg 459
Query: 241 gcttccaacggggacgccgctgttgctgcgcggcccaagacgaagcctaaggacggcggt 300
||||| || |||||||| ||||| || ||||||| ||||||||||| ||||| || |
Sbjct: 460 gcttctaatggggacgctgctgtggccacgcggccgaagacgaagccgaaggatgggg-- 517
Query: 301 gaaggcgacggcggggaggatcctgagcaggctaagcttcgtgctgggctgaattctgct 360
|||| | | ||||||||||| |||||||| ||||| || || ||| |||| || ||
Sbjct: 518 -aaggtggagatggggaggatcccgagcaggcgaagctccgggccgggttgaactcggcg 576
Query: 361 atcatcagggagaagccgaatatcaagtggaatgatgttgcggggttggagagcgctaaa 420
|| || ||||||||||||||| | ||||||||||||||||| ||||||||||| || ||
Sbjct: 577 attataagggagaagccgaatgtgaagtggaatgatgttgctgggttggagagtgcgaag 636
Query: 421 cagtccttgcaggaggcggttatcttgcctgtcaagttccctcagttcttcactggtaaa 480
||| | ||||||||||| || ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 637 caggcgttgcaggaggctgtgatcttgcctgtgaagttccctcagtttttcacaggtaag 696
Query: 481 agacgaccttggagagcttttttgttgtacggaccacctggaacaggtaaatcatacttg 540
|| |||| |||||||| ||||| ||||| ||||||||||||||||| |||||||| ||
Sbjct: 697 cgaagaccctggagagcatttttattgtatggaccacctggaacaggaaaatcatattta 756
Query: 541 gccaaggccgttgcaacagaagctgattctacatttttcagtgtttcttcatcagacctg 600
|||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 757 gccaaggcagttgcaacagaagctgactccacatttttcagtatttcttcatcagacctt 816
Query: 601 gtttcaaagtggatgggtgaaagtgaaaagctggtttcaaatctttttcaaatggcccgc 660
|||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| ||
Sbjct: 817 gtttcaaagtggatgggtgagagtgaaaagctggtgtcaaaccttttccaaatggctcga 876
Query: 661 gaaagtgcaccttctatcatatttgttgatgaaattgattctctctgtggtcagcgtgga 720
|||| ||| |||||||||||||||||||||||||| ||||| || ||||||||||| |||
Sbjct: 877 gaaaatgccccttctatcatatttgttgatgaaatagattccctatgtggtcagcgcgga 936
Query: 721 gagggcaatgagagtgaagcttcaagacgaattaaaactgaacttctagtgcagatgcag 780
|| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 937 gaaggcaatgagagtgaagcttcaagacggattaaaacagaacttctggtgcagatgcag 996
Query: 781 ggtgtaggaaacaatgatcagaaagttcttgttcttgcagcaacaaatacaccttatgct 840
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 997 ggtgtaggaaacaatgatcagaaagttcttgttcttgcagcaacaaacacaccctatgct 1056
Query: 841 ctcgatcaggcaataaggcggcgctttgataagcgtatatacattccactgccagatgtg 900
|| || |||||||||||||| || ||||||||||||||||| ||||| || |||||| ||
Sbjct: 1057 ctagaccaggcaataaggcgtcgttttgataagcgtatatatattcctctaccagatttg 1116
Query: 901 aaggctcgccaacacatgttcaaggtgcatttaggagatactccccataacttggctgaa 960
||||| |||||||||||||||||||| ||| | |||||||| |||||||||||| ||||
Sbjct: 1117 aaggcccgccaacacatgttcaaggtacatctcggagataccccccataacttgaatgaa 1176
Query: 961 agtgattttgaacacttggctcgcaagacagagggattttctggttcagatatatctgtc 1020
|||||||||||| ||||||| ||| |||||||| ||||||||||||||||| |||||
Sbjct: 1177 agtgattttgaatacttggccagcagaacagaggggttttctggttcagatatctctgtt 1236
Query: 1021 tgtgtgaaagatgttttatttgaacctgttcgcaaaacccaagatgccatgtttttcttt 1080
|||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 1237 tgtgtgaaggatgttttatttgaacctgtccgcaaaacccaagatgctatgttcttcttt 1296
Query: 1081 aagagtcctgagggtatgtggattccatgcggaccaaagcaacagggtgcaatacaaata 1140
|||| |||||||||||||||||| ||||| ||||||||||||||||||||| | |||||
Sbjct: 1297 aagaatcctgagggtatgtggatcccatgtggaccaaagcaacagggtgcagtgcaaatc 1356
Query: 1141 acaatgcaagaccttgctacaaaaggtcttgcttctcagatccttccgccacctatatca 1200
|||||||| || |||||| ||||||| |||||||||||||||||||| || |||||| |
Sbjct: 1357 acaatgcaggatcttgctgcaaaaggccttgcttctcagatccttccaccccctataacg 1416
Query: 1201 agaaccgattttgacaaagtacttgccagacaaaggcctacagtaagcaagtctgacctt 1260
||||| |||||||| || ||||| || |||||||| |||||||||||||| ||||||
Sbjct: 1417 agaacagattttgaaaaggtactggctagacaaagacctacagtaagcaaaaaagacctt 1476
Query: 1261 gaagtccacgagagattcacaaaggagtttggagaggaaggttaa 1305
|| || || ||||||||||| |||||||||||||| |||||||||
Sbjct: 1477 gaggttcatgagagattcactaaggagtttggagaagaaggttaa 1521
>gnl|LJGI|TC58885 homologue to UniRef100_A7R0D5 Cluster: Chromosome chr6
scaffold_305, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_305, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (45%)
Length = 813
Score = 1176 bits (593), Expect = 0.0
Identities = 593/593 (100%)
Strand = Plus / Plus
Query: 1 atgtatagcaatttcaaggagcaagcgatcgagtacgtgaagcaagcggtacacgaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atgtatagcaatttcaaggagcaagcgatcgagtacgtgaagcaagcggtacacgaagac 280
Query: 61 aatgctgggaactacgcaaaagccttccctctctacatgaacgccttagagtacttcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aatgctgggaactacgcaaaagccttccctctctacatgaacgccttagagtacttcaaa 340
Query: 121 acgcatctcaaatacgagaagaaccctaagatcaaagaagccatcacgcagcgtttcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 acgcatctcaaatacgagaagaaccctaagatcaaagaagccatcacgcagcgtttcacc 400
Query: 181 gagtatctccgccgcgccgaggagatccgtgctgtgcttgatgatggtggccccggcccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gagtatctccgccgcgccgaggagatccgtgctgtgcttgatgatggtggccccggcccg 460
Query: 241 gcttccaacggggacgccgctgttgctgcgcggcccaagacgaagcctaaggacggcggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gcttccaacggggacgccgctgttgctgcgcggcccaagacgaagcctaaggacggcggt 520
Query: 301 gaaggcgacggcggggaggatcctgagcaggctaagcttcgtgctgggctgaattctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaaggcgacggcggggaggatcctgagcaggctaagcttcgtgctgggctgaattctgct 580
Query: 361 atcatcagggagaagccgaatatcaagtggaatgatgttgcggggttggagagcgctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 atcatcagggagaagccgaatatcaagtggaatgatgttgcggggttggagagcgctaaa 640
Query: 421 cagtccttgcaggaggcggttatcttgcctgtcaagttccctcagttcttcactggtaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cagtccttgcaggaggcggttatcttgcctgtcaagttccctcagttcttcactggtaaa 700
Query: 481 agacgaccttggagagcttttttgttgtacggaccacctggaacaggtaaatcatacttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 agacgaccttggagagcttttttgttgtacggaccacctggaacaggtaaatcatacttg 760
Query: 541 gccaaggccgttgcaacagaagctgattctacatttttcagtgtttcttcatc 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gccaaggccgttgcaacagaagctgattctacatttttcagtgtttcttcatc 813
>gnl|LJGI|TC59056 homologue to UniRef100_A7R0D5 Cluster: Chromosome chr6
scaffold_305, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_305, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (44%)
Length = 802
Score = 482 bits (243), Expect = e-135
Identities = 497/581 (85%), Gaps = 3/581 (0%)
Strand = Plus / Plus
Query: 1 atgtatagcaatttcaaggagcaagcgatcgagtacgtgaagcaagcggtacacgaagac 60
|||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 225 atgtatagcaatttcaaggagcaagcaatagagtacgtgaagcaagcggtgcaggaagac 284
Query: 61 aatgctgggaactacgcaaaagccttccctctctacatgaacgccttagagtacttcaaa 120
|||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 285 aatgctggaaactacgccaaagccttccctctctacatgaacgctttggagtatttcaag 344
Query: 121 acgcatctcaaatacgagaagaaccctaagatcaaagaagccatcacgcagcgtttcacc 180
|| |||||||| ||||||||||| ||||||||||| ||||| || |||||| ||||||
Sbjct: 345 acccatctcaagtacgagaagaatcctaagatcaaggaagcgattacgcagaaattcacc 404
Query: 181 gagtatctccgccgcgccgaggagatccgtgctgtgcttgatgatggtggccccggcccg 240
|||||| | |||||||| ||||||||| | ||||| || ||||| || || |||||||||
Sbjct: 405 gagtatttgcgccgcgcggaggagatcagggctgttctagatgacggaggacccggcccg 464
Query: 241 gcttccaacggggacgccgctgttgctgcgcggcccaagacgaagcctaaggacggcggt 300
||||| || |||||||| ||||| || ||||||| ||||||||||| ||||| ||
Sbjct: 465 gcttctaatggggacgctgctgtggccacgcggccgaagacgaagccgaagga---tggg 521
Query: 301 gaaggcgacggcggggaggatcctgagcaggctaagcttcgtgctgggctgaattctgct 360
||||| | | ||||||||||| |||||||| ||||| || || ||| |||| || ||
Sbjct: 522 gaaggtggagatggggaggatcccgagcaggcgaagctccgggccgggttgaactcggcg 581
Query: 361 atcatcagggagaagccgaatatcaagtggaatgatgttgcggggttggagagcgctaaa 420
|| || ||||||||||||||| | ||||||||||||||||| ||||||||||| || ||
Sbjct: 582 attataagggagaagccgaatgtgaagtggaatgatgttgctgggttggagagtgcgaag 641
Query: 421 cagtccttgcaggaggcggttatcttgcctgtcaagttccctcagttcttcactggtaaa 480
||| | ||||||||||| || ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 642 caggcgttgcaggaggctgtgatcttgcctgtgaagttccctcagtttttcacaggtaag 701
Query: 481 agacgaccttggagagcttttttgttgtacggaccacctggaacaggtaaatcatacttg 540
|| |||| |||||||| ||||| ||||| ||||||||||||||||| |||||||| ||
Sbjct: 702 cgaagaccctggagagcatttttattgtatggaccacctggaacaggaaaatcatattta 761
Query: 541 gccaaggccgttgcaacagaagctgattctacatttttcag 581
|||||||| ||||||||||||||||| || |||||||||||
Sbjct: 762 gccaaggcagttgcaacagaagctgactccacatttttcag 802