Miyakogusa Predicted Gene
- Lj3g3v2995580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2995580.1 Non Chatacterized Hit- tr|C6TEB1|C6TEB1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36624 PE,78.31,0,C2H2
and C2HC zinc fingers,NULL; ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
AZ2-RELATED,NULL; ZINC FINGER,CUFF.45098.1
(984 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS360083 homologue to UniRef100_A7QFD3 Cluster: Chromos... 486 e-136
gnl|LJGI|BP051546 homologue to UniRef100_A7PWB2 Cluster: Chromos... 198 5e-50
gnl|LJGI|BW621621 homologue to UniRef100_A7QFD3 Cluster: Chromos... 123 2e-27
gnl|LJGI|TC76316 homologue to UniRef100_A7PWB2 Cluster: Chromoso... 72 7e-12
>gnl|LJGI|FS360083 homologue to UniRef100_A7QFD3 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (17%)
Length = 785
Score = 486 bits (245), Expect = e-136
Identities = 245/245 (100%)
Strand = Plus / Minus
Query: 740 aattatgtgggaaaacatttgcagtcaaaggggattggaggactcatgagaagaactgtg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aattatgtgggaaaacatttgcagtcaaaggggattggaggactcatgagaagaactgtg 726
Query: 800 gcaagttgtggtattgcacttgtggctcagatttcaagcacaagagatctctcaaagatc 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gcaagttgtggtattgcacttgtggctcagatttcaagcacaagagatctctcaaagatc 666
Query: 860 acattagatcctttggaaagggtcatgaccctcttcttcctaattctcttgatgaagttt 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 acattagatcctttggaaagggtcatgaccctcttcttcctaattctcttgatgaagttt 606
Query: 920 ttgaggaggagaatgaatgtgttaccgggtcggatgaagatgaagttcttgctcatgcat 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttgaggaggagaatgaatgtgttaccgggtcggatgaagatgaagttcttgctcatgcat 546
Query: 980 gacct 984
|||||
Sbjct: 545 gacct 541
>gnl|LJGI|BP051546 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 574
Score = 198 bits (100), Expect = 5e-50
Identities = 255/306 (83%), Gaps = 3/306 (0%)
Strand = Plus / Minus
Query: 555 cagaaaaggaccagactcacttagaggaacacaaccagctgcaatgttaaggctaccatg 614
||||||||| ||||| || || ||||||||||||||| | |||||| |||| || |||||
Sbjct: 574 cagaaaagggccagagtctctaagaggaacacaaccaacagcaatgctaagactcccatg 515
Query: 615 ctattgctgtgctcagggttgcaagaacaacatcaaccatcctagggctaagcctttaaa 674
|||||||||||| | || |||||||||||||| ||||||| || || || || | ||
Sbjct: 514 ctattgctgtgcaccaggatgcaagaacaacattgaccatccaagagcaaaaccactcaa 455
Query: 675 ggacttcagaacactccaaacccactacaaaagaaagcatgggacaaagcccttcatgtg 734
||||||||||| |||||||| || ||||| |||||||| || | || || ||||||||
Sbjct: 454 agacttcagaaccctccaaacacattacaagagaaagcacggaatcaaacctttcatgtg 395
Query: 735 cagaaaattatgtgggaaaacatttgcagtcaaaggggattggaggactcatgagaagaa 794
|||||||| || | ||| | |||||||| | ||| |||||||||||||||||||||||
Sbjct: 394 cagaaaat---gttgcaaagcgtttgcagtgagaggagattggaggactcatgagaagaa 338
Query: 795 ctgtggcaagttgtggtattgcacttgtggctcagatttcaagcacaagagatctctcaa 854
|||||| ||| | ||||||||| ||||||| || ||||||||||||||||||||||| ||
Sbjct: 337 ctgtgggaagctttggtattgctcttgtgggtccgatttcaagcacaagagatctcttaa 278
Query: 855 agatca 860
|||||
Sbjct: 277 ggatca 272
>gnl|LJGI|BW621621 homologue to UniRef100_A7QFD3 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (11%)
Length = 488
Score = 123 bits (62), Expect = 2e-27
Identities = 83/90 (92%)
Strand = Plus / Plus
Query: 409 tcttttaatcaggagagaaggttttggataccaactcctgcccagatccttgttggaccg 468
|||||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 399 tcttttaaccaagagagaaggttttggataccaactcctgcacagatccttgttggtccc 458
Query: 469 atgcagtttgtttgctccatatgcagcaag 498
||||||||| |||||||||||||||||||
Sbjct: 459 atgcagttttcttgctccatatgcagcaag 488
Score = 75.8 bits (38), Expect = 5e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 1 atgggtttgatggagtgtgatgtggaggacaagaatctatgccttcatgccccaacattc 60
|||||||||| |||||| |||| || |||||||||||||||||||| |||||| |||
Sbjct: 45 atgggtttgagggagtgcaatgtagaagacaagaatctatgccttcaaaccccaaatttc 104
Query: 61 attgagtggctcaaacca 78
||||| ||||||||||||
Sbjct: 105 attgaatggctcaaacca 122
Score = 67.9 bits (34), Expect = 1e-10
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 265 aaggtggaacacgtgactgtggctttgcacattggattgcct 306
||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 267 aaggtggaacaggtgactgtgtctttgcacattggattgcct 308
>gnl|LJGI|TC76316 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 588
Score = 71.9 bits (36), Expect = 7e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 784 catgagaagaactgtggcaagttgtggtattgcacttgtggctcagatttcaagcacaag 843
||||||||||| ||||| ||| | |||||||||| ||||| || |||||||||||||||
Sbjct: 9 catgagaagaattgtgggaagctttggtattgcatctgtgggtctgatttcaagcacaag 68
Query: 844 agatctctcaaagatcacat 863
|| ||||| || ||||||||
Sbjct: 69 aggtctctaaaggatcacat 88