Miyakogusa Predicted Gene

Lj3g3v2994570.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2994570.1 Non Chatacterized Hit- tr|I1LKS4|I1LKS4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53931
PE,78,0,coiled-coil,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.45105.1
         (1884 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73369                                                      624   e-178
gnl|LJGI|TC63468 similar to UniRef100_A7PE35 Cluster: Chromosome...    60   5e-08

>gnl|LJGI|TC73369 
          Length = 906

 Score =  624 bits (315), Expect = e-178
 Identities = 364/371 (98%), Gaps = 7/371 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1520 gcttgtcactggacagtagccaaaatgagaacaaaccaaaagctaagcccaagcaaaaga 1579
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1    gcttgtcactggacagtagccaaa-tgagaacaaaccaaaagctaagcccaagcaaaaga 59

                                                                        
Query: 1580 ataccgcatatggacatgataggtttatggaaccaaaggaatctgcttgttt-accaatt 1638
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 60   ataccgcatatggacatgataggtttatggaaccaaaggaatctgcttgttttaccaatt 119

                                                                        
Query: 1639 -catggttctagtctatctgtggtt-ggtaaccaggacactt-ctcaagcaaaggaatca 1695
             |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 120  tcatggttctagtctatctgtggtttggtaaccaggacactttctcaagcaaaggaatca 179

                                                                        
Query: 1696 gctgacctt-gggaattt-gccgctacctgatttaggttctatcgaagaatttggtgtat 1753
            ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 180  gctgacctttgggaattttgccgctacctgatttaggttctatcgaagaatttggtgtat 239

                                                                        
Query: 1754 ctggtgagcttggtgggccgcaagatcttagttcttggttgaacaactttgatgacgatg 1813
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240  ctggtgagcttggtgggccgcaagatcttagttcttggttgaacaactttgatgacgatg 299

                                                                        
Query: 1814 gtttgcaagaggatgattgtataggcctggaaataccaatggatgacctatcagacttaa 1873
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300  gtttgcaagaggatgattgtataggcctggaaataccaatggatgacctatcagacttaa 359

                       
Query: 1874 tgcttatgtga 1884
            |||||||||||
Sbjct: 360  tgcttatgtga 370


>gnl|LJGI|TC63468 similar to UniRef100_A7PE35 Cluster: Chromosome chr11 scaffold_13,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_13, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 881

 Score = 60.0 bits (30), Expect = 5e-08
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1802 ttgatgacgatggtttgcaagaggatgattgtataggcctggaaataccaatggatgacc 1861
            ||||||||||||| ||||| ||  |||| ||||| ||||| ||||| || ||||||||||
Sbjct: 431  ttgatgacgatggattgcatgataatgactgtatgggccttgaaattcccatggatgacc 490

                      
Query: 1862 tatcagactt 1871
            | ||||||||
Sbjct: 491  tttcagactt 500