Miyakogusa Predicted Gene

Lj3g3v2994520.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2994520.1 CUFF.45093.1
         (669 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66115 homologue to UniRef100_A7P428 Cluster: Chromoso...    56   3e-07
gnl|LJGI|TC60327 homologue to UniRef100_A7P428 Cluster: Chromoso...    56   3e-07

>gnl|LJGI|TC66115 homologue to UniRef100_A7P428 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 846

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 425 ctgcagaagaccatgaatggtggtggagatctgtgctgtgtggtggatcaac 476
           |||| ||||| ||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 567 ctgctgaagatcatgaatggtggtggaggtctttcctttgtggtggatcaac 618


>gnl|LJGI|TC60327 homologue to UniRef100_A7P428 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 963

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 425 ctgcagaagaccatgaatggtggtggagatctgtgctgtgtggtggatcaac 476
           |||| ||||| ||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 411 ctgctgaagatcatgaatggtggtggaggtctttcctttgtggtggatcaac 462