Miyakogusa Predicted Gene
- Lj3g3v2993420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2993420.1 Non Chatacterized Hit- tr|I1LKQ8|I1LKQ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35313 PE,73,0,GTPase
activation domain, GAP,Rho GTPase activation protein; P21-Rho-binding
domain,PAK-box/P21-Rho-,CUFF.45084.1
(1470 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68892 similar to UniRef100_A7PPC2 Cluster: Chromosome... 408 e-113
gnl|LJGI|TC77624 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n... 291 6e-78
gnl|LJGI|TC69514 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n... 291 6e-78
gnl|LJGI|TC58702 UniRef100_O82458 Cluster: Rac GTPase activating... 98 2e-19
gnl|LJGI|TC65150 UniRef100_O82459 Cluster: Rac GTPase activating... 86 7e-16
gnl|LJGI|TC74984 58 2e-07
gnl|LJGI|TC78169 similar to UniRef100_O82460 Cluster: Rac GTPase... 54 3e-06
>gnl|LJGI|TC68892 similar to UniRef100_A7PPC2 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1002
Score = 408 bits (206), Expect = e-113
Identities = 332/374 (88%)
Strand = Plus / Plus
Query: 665 aaggcattgatgtacattgtttggcaggactaatcaaggcttggtttagggaactgccta 724
|||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||
Sbjct: 1 aaggtattgatgtacattgtttggcaggactaattaaggcttggtttagggagcttccta 60
Query: 725 caggtattctggattctttatcaccagagcatgtaatgcaatgtcaaaatgaagaggatt 784
|||| ||||||||||| ||||| |||||||| ||||||||||| ||| ||| || || |
Sbjct: 61 caggaattctggattcattatcgccagagcaggtaatgcaatgcgaaactgaggaagaat 120
Query: 785 gtgctgaactggcaaggcaactacctcacactgaagcttcccttcttgactgggctatta 844
||| ||| || |||||| | |||||||||||||||||| | || | |||||||| || |
Sbjct: 121 gtgttgagctagcaaggaatctacctcacactgaagctgcactcttggactgggccatca 180
Query: 845 atctgatggctgatgttgtccaagaggaacatctgagtaagatgaatgcacacaatattg 904
||||||||||||||||||||||| |||||||| | | |||||||||||| | || ||||
Sbjct: 181 atctgatggctgatgttgtccaacaggaacatgttaataagatgaatgcgcgtaacattg 240
Query: 905 ccatggttttcgcgccaaatatgactcagatggcagaccctttgactgcattgatgtatg 964
|||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 ccatggtttttgcaccaaatatgactcagatggcagaccctttcactgcattgatgtatg 300
Query: 965 cagttcaagtgatgaacttcttgaagacactaatattaaggacactgcagcgaagaaagg 1024
|||||||||||||||| ||||||||| |||| |||||||||||||||||| ||||||||
Sbjct: 301 cagttcaagtgatgaatttcttgaagtcacttatattaaggacactgcaggaaagaaagg 360
Query: 1025 attctgtggtagaa 1038
||||||||||||||
Sbjct: 361 attctgtggtagaa 374
Score = 75.8 bits (38), Expect = 7e-13
Identities = 104/126 (82%)
Strand = Plus / Plus
Query: 1173 agaatgttcccctgaacccttccaaaacaaagattcaactgaaggagaacctgaaagttt 1232
|||||||||||||||||| ||||||| || ||||||| ||||||| |||| |||||
Sbjct: 506 agaatgttcccctgaaccactccaaaataacacctcaactggaggagaatctgacagttt 565
Query: 1233 gatgagctcttctgagattctagtttgtgaagaggatttgtattgtcagtttccacccaa 1292
| | ||||||||||||| | | |||| | ||||| |||||||| |||||||||||||
Sbjct: 566 ggtaagctcttctgagaatacaatttgcaatgaggacttgtattgcgagtttccacccaa 625
Query: 1293 aggaaa 1298
||||||
Sbjct: 626 aggaaa 631
>gnl|LJGI|TC77624 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n=1; Nicotiana
tabacum|Rep: RhoGAP1 - Nicotiana tabacum (Common
tobacco), partial (16%)
Length = 926
Score = 291 bits (147), Expect = 6e-78
Identities = 156/159 (98%)
Strand = Plus / Plus
Query: 462 tgcaactgtgtttggagtttcaacagaatcaatgcagttatcatatgacacaagagggaa 521
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgcaactatgtttggagtttcaacagaatcaatgcagttatcatatgacacaagagggaa 424
Query: 522 cagtgtgccaacaattttgttacaaatgcaaaggcacttgtatgcccaaggagggttgca 581
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cagtgtgccgacaattttgttacaaatgcaaaggcacttgtatgcccaaggagggttgca 484
Query: 582 ggcagaggggattttcagaattaatgcagacaatactca 620
||||||||||||||||||||||||| |||||||||||||
Sbjct: 485 ggcagaggggattttcagaattaatacagacaatactca 523
Score = 190 bits (96), Expect = 2e-47
Identities = 102/104 (98%)
Strand = Plus / Plus
Query: 809 ctcacactgaagcttcccttcttgactgggctattaatctgatggctgatgttgtccaag 868
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 520 ctcacactgaagcttcccttcttgactgggctattaatctgatggttgatgttgtccaag 579
Query: 869 aggaacatctgagtaagatgaatgcacacaatattgccatggtt 912
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 580 aggaacatctgagtaggatgaatgcacacaatattgccatggtt 623
>gnl|LJGI|TC69514 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n=1; Nicotiana
tabacum|Rep: RhoGAP1 - Nicotiana tabacum (Common
tobacco), partial (16%)
Length = 547
Score = 291 bits (147), Expect = 6e-78
Identities = 156/159 (98%)
Strand = Plus / Plus
Query: 462 tgcaactgtgtttggagtttcaacagaatcaatgcagttatcatatgacacaagagggaa 521
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tgcaactatgtttggagtttcaacagaatcaatgcagttatcatatgacacaagagggaa 194
Query: 522 cagtgtgccaacaattttgttacaaatgcaaaggcacttgtatgcccaaggagggttgca 581
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cagtgtgccgacaattttgttacaaatgcaaaggcacttgtatgcccaaggagggttgca 254
Query: 582 ggcagaggggattttcagaattaatgcagacaatactca 620
||||||||||||||||||||||||| |||||||||||||
Sbjct: 255 ggcagaggggattttcagaattaatacagacaatactca 293
Score = 190 bits (96), Expect = 2e-47
Identities = 102/104 (98%)
Strand = Plus / Plus
Query: 809 ctcacactgaagcttcccttcttgactgggctattaatctgatggctgatgttgtccaag 868
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 290 ctcacactgaagcttcccttcttgactgggctattaatctgatggttgatgttgtccaag 349
Query: 869 aggaacatctgagtaagatgaatgcacacaatattgccatggtt 912
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 350 aggaacatctgagtaggatgaatgcacacaatattgccatggtt 393
>gnl|LJGI|TC58702 UniRef100_O82458 Cluster: Rac GTPase activating protein 1; n=1; Lotus
japonicus|Rep: Rac GTPase activating protein 1 - Lotus
japonicus, complete
Length = 2109
Score = 97.6 bits (49), Expect = 2e-19
Identities = 498/645 (77%), Gaps = 2/645 (0%)
Strand = Plus / Plus
Query: 337 atggaaattggttggcccactaatgtgcgccatgttgcgcatgttacctttgataggttc 396
||||| ||||||||||| | |||||| | ||||| || ||||||||||| || | |||
Sbjct: 536 atggagattggttggccttccaatgtgaggcatgtggctcatgttaccttcgaccgcttc 595
Query: 397 aatgg-tttcttgggtttgcctgttgagtttgaacctgaagtccccacaaggcctcccag 455
|||| |||||||| |||||||||||| |||||||||||||| |||| || || |||||
Sbjct: 596 catggctttcttgg-tttgcctgttgaatttgaacctgaagttcccaggagaccacccag 654
Query: 456 tgcaagtgcaactgtgtttggagtttcaacagaatcaatgcagttatcatatgacacaag 515
||||| ||| || ||||| |||||||||||||| |||||| | || | ||| | ||
Sbjct: 655 cgcaagcacaagcgtttttggggtttcaacagaatctatgcagctttcttttgatgccag 714
Query: 516 agggaacagtgtgccaacaattttgttacaaatgcaaaggcacttgtatgcccaaggagg 575
||| || ||||| || ||||| ||| | ||||||||| || |||||||| | ||||||
Sbjct: 715 aggaaatagtgtacctacaatattgctgttaatgcaaagacatttgtatgcgcgaggagg 774
Query: 576 gttgcaggcagaggggattttcagaattaatgcagacaatactcaagaggaatatgttag 635
| ||||| || || || |||||||||||||| || |||| ||||||||| ||| ||
Sbjct: 775 cctccaggctgaaggaatattcagaattaatgctgaaaatagtcaagaggagcttgtgag 834
Query: 636 ggatcaaataaataggggagtgatcccagaaggcattgatgtacattgtttggcaggact 695
||| ||| |||| || ||||| | || | ||| ||||||| || || |||||||| ||
Sbjct: 835 ggaacaattaaacagaggagttgtaccgaatggcgttgatgtgcactgcttggcaggtct 894
Query: 696 aatcaaggcttggtttagggaactgcctacaggtattctggattctttatcaccagagca 755
|| |||||||||||||| ||||| || || || || |||| || | ||||||||| |
Sbjct: 895 tataaaggcttggtttagagaactcccaactggaatattggaccctctttcaccagagga 954
Query: 756 tgtaatgcaatgtcaaaatgaagaggattgtgctgaactggcaaggcaactacctcacac 815
|| ||||| | || ||||| || |||| | || | |||| || |||| ||
Sbjct: 955 ggtgatgcagtcccagtcagaagaagaatgtgaccagcttgtgaggcttcttcctccaac 1014
Query: 816 tgaagcttcccttcttgactgggctattaatctgatggctgatgttgtccaagaggaaca 875
|||||| | || || || ||||| || || || ||||| ||||||| ||| ||||||
Sbjct: 1015 agaagctgctctgctagattgggccataaacctaatggcagatgttgctcaaatggaaca 1074
Query: 876 tctgagtaagatgaatgcacacaatattgccatggttttcgcgccaaatatgactcagat 935
| | | ||||||||||| | |||||||| |||||||| || ||||| |||||||| ||
Sbjct: 1075 ttttaacaagatgaatgcgcgtaatattgcaatggtttttgcaccaaacatgactcatat 1134
Query: 936 ggcagaccctttgactgcattgatgtatgcagttcaagtgatgaa 980
||| || ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 1135 ggccgatcctttgactgctttgatgtatgcagtacaagtcatgaa 1179
>gnl|LJGI|TC65150 UniRef100_O82459 Cluster: Rac GTPase activating protein 2; n=1; Lotus
japonicus|Rep: Rac GTPase activating protein 2 - Lotus
japonicus, complete
Length = 1998
Score = 85.7 bits (43), Expect = 7e-16
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 886 atgaatgcacacaatattgccatggttttcgcgccaaatatgactcagatggcagaccct 945
|||||||||| ||||||||| ||||||||||| || || ||||| ||||||| ||||||
Sbjct: 1159 atgaatgcacgcaatattgctatggttttcgcccccaacatgacacagatggtcgaccct 1218
Query: 946 ttgactgcattgatgtatgcagttcaagtgatgaacttc 984
|||||||||||||| | || || ||||| |||||||||
Sbjct: 1219 ttgactgcattgattcacgcggtgcaagtcatgaacttc 1257
>gnl|LJGI|TC74984
Length = 804
Score = 58.0 bits (29), Expect = 2e-07
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 113 cttcttcttcctctgcttcctctgtttcccctg 145
||||||||||||||| |||||||||||||||||
Sbjct: 243 cttcttcttcctctgtttcctctgtttcccctg 275
>gnl|LJGI|TC78169 similar to UniRef100_O82460 Cluster: Rac GTPase activating protein
3; n=1; Lotus japonicus|Rep: Rac GTPase activating
protein 3 - Lotus japonicus, partial (23%)
Length = 797
Score = 54.0 bits (27), Expect = 3e-06
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 901 attgccatggttttcgcgccaaatatgactcagatggcagaccctttgactgcattgatg 960
||||| |||||||| || ||||| |||||||||||| | || ||| | || || |||||
Sbjct: 53 attgcaatggtttttgctccaaacatgactcagatgtctgatcctctaaccgccctgatg 112
Query: 961 tatgcagttcaagtgatgaactt 983
|||| |||||||||||||||||
Sbjct: 113 catgcggttcaagtgatgaactt 135