Miyakogusa Predicted Gene
- Lj3g3v2986080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2986080.1 tr|I3SP94|I3SP94_LOTJA Uroporphyrinogen
decarboxylase OS=Lotus japonicus PE=2 SV=1,96.98,0,UROPORPHYRINOGEN
DECARBOXYLASE,Uroporphyrinogen decarboxylase HemE;
METHYLTETRAHYDROFOLATE:HOMOCYSTE,CUFF.45129.1
(660 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61806 similar to UniRef100_A5AYA5 Cluster: Uroporphyr... 1181 0.0
gnl|LJGI|TC73245 similar to UniRef100_Q93ZB6 Cluster: Uroporphyr... 884 0.0
gnl|LJGI|AW719422 125 4e-28
>gnl|LJGI|TC61806 similar to UniRef100_A5AYA5 Cluster: Uroporphyrinogen
decarboxylase; n=1; Vitis vinifera|Rep: Uroporphyrinogen
decarboxylase - Vitis vinifera (Grape), partial (46%)
Length = 871
Score = 1181 bits (596), Expect = 0.0
Identities = 596/596 (100%)
Strand = Plus / Plus
Query: 1 atggctacttccattaacagctgtgggttgggatggaaatcttcctccttgtttgcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atggctacttccattaacagctgtgggttgggatggaaatcttcctccttgtttgcacac 173
Query: 61 tctactactactggcttcaattcaatttctccttctttcaaaccaaaacccaagctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tctactactactggcttcaattcaatttctccttctttcaaaccaaaacccaagctttct 233
Query: 121 ctcacttgctccgctgcctcctcttcttctgatccgctcttggttaaggctgctagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ctcacttgctccgctgcctcctcttcttctgatccgctcttggttaaggctgctagggga 293
Query: 181 gatcctgttagtcgtcctccagcatggatgatgcgccaggcgggaaggtacatggctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gatcctgttagtcgtcctccagcatggatgatgcgccaggcgggaaggtacatggctgtt 353
Query: 241 tacagaaagcttgctgagaagcatccctcatttcgagagagatcagagacaactgatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tacagaaagcttgctgagaagcatccctcatttcgagagagatcagagacaactgatctc 413
Query: 301 attgtggaaatttctttgcagccttggaaagctttcaggcctgatggagtgattattttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 attgtggaaatttctttgcagccttggaaagctttcaggcctgatggagtgattattttc 473
Query: 361 tctgacatccttacacctctacctgcatttggaattgaatttgacatagaagatgtaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tctgacatccttacacctctacctgcatttggaattgaatttgacatagaagatgtaagg 533
Query: 421 ggacctgttatacagtcacctattcgctctgaggagggattaaaggctttgcactcaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ggacctgttatacagtcacctattcgctctgaggagggattaaaggctttgcactcaatc 593
Query: 481 gacttggacagacttagatttgttggagattcacttaagctcctgcgccaggaggttggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gacttggacagacttagatttgttggagattcacttaagctcctgcgccaggaggttggt 653
Query: 541 ggtcatgctgccgttttgggttttgtgggagcaccttggacattggcaacatatat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ggtcatgctgccgttttgggttttgtgggagcaccttggacattggcaacatatat 709
Score = 89.7 bits (45), Expect = 2e-17
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 593 atattgaggactctgctttctcatttgtcacaggcgatagcagattacagtgtttgccaa 652
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 774 atattgaggactctgctttctcatttgtcaca-gcgatagcagattacattgttt-ccaa 831
Query: 653 gttga 657
|||||
Sbjct: 832 gttga 836
>gnl|LJGI|TC73245 similar to UniRef100_Q93ZB6 Cluster: Uroporphyrinogen
decarboxylase; n=1; Arabidopsis thaliana|Rep:
Uroporphyrinogen decarboxylase - Arabidopsis thaliana
(Mouse-ear cress), partial (83%)
Length = 1778
Score = 884 bits (446), Expect = 0.0
Identities = 446/446 (100%)
Strand = Plus / Plus
Query: 151 gatccgctcttggttaaggctgctaggggagatcctgttagtcgtcctccagcatggatg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gatccgctcttggttaaggctgctaggggagatcctgttagtcgtcctccagcatggatg 148
Query: 211 atgcgccaggcgggaaggtacatggctgtttacagaaagcttgctgagaagcatccctca 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atgcgccaggcgggaaggtacatggctgtttacagaaagcttgctgagaagcatccctca 208
Query: 271 tttcgagagagatcagagacaactgatctcattgtggaaatttctttgcagccttggaaa 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tttcgagagagatcagagacaactgatctcattgtggaaatttctttgcagccttggaaa 268
Query: 331 gctttcaggcctgatggagtgattattttctctgacatccttacacctctacctgcattt 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gctttcaggcctgatggagtgattattttctctgacatccttacacctctacctgcattt 328
Query: 391 ggaattgaatttgacatagaagatgtaaggggacctgttatacagtcacctattcgctct 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggaattgaatttgacatagaagatgtaaggggacctgttatacagtcacctattcgctct 388
Query: 451 gaggagggattaaaggctttgcactcaatcgacttggacagacttagatttgttggagat 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaggagggattaaaggctttgcactcaatcgacttggacagacttagatttgttggagat 448
Query: 511 tcacttaagctcctgcgccaggaggttggtggtcatgctgccgttttgggttttgtggga 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcacttaagctcctgcgccaggaggttggtggtcatgctgccgttttgggttttgtggga 508
Query: 571 gcaccttggacattggcaacatatat 596
||||||||||||||||||||||||||
Sbjct: 509 gcaccttggacattggcaacatatat 534
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 593 atattgaggactctgctttctcatttgtcacaggcgatagcagattacagtgtttgccaa 652
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 599 atattgaggactctgctttctcatttgtcacaggcgatagcagattacattgttttccaa 658
Query: 653 gttgaatc 660
||||||||
Sbjct: 659 gttgaatc 666
>gnl|LJGI|AW719422
Length = 304
Score = 125 bits (63), Expect = 4e-28
Identities = 84/92 (91%)
Strand = Plus / Minus
Query: 60 ctctactactactggcttcaattcaatttctccttctttcaaaccaaaacccaagctttc 119
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 304 ctctactactagtggcttcaatttgatttctccttctttcaaaccaaaacccaagttttn 245
Query: 120 tctcacttgctccgctgcctcctcttcttctg 151
| || ||||||||| |||||||||||||||||
Sbjct: 244 tntcncttgctccgttgcctcctcttcttctg 213